Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq37 127 2e-24 seq1 89.7 5e-13 >seq37 Length=429747 Score = 127 bits (140), Expect = 2e-24 Identities = 358/537 (67%), Gaps = 16/537 (3%) Strand=Plus/Minus Query 22107 TGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCG 22166 ||||||||||||||| ||||| | | ||||||| || || | |||||| || | Sbjct 384056 TGTCCACTGTAAACTTGATGGCATCAGTTGCCGGTTGCGTACGCAAATAATAAGCACCGG 383997 Query 22167 TCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCA 22226 |||| |||||| ||||||| ||||||| || || || | ||| || | | || Sbjct 383996 TCTTAAGACCCTTCTTCCATCCGTAAAAGTGCATGCTAGTAAGTTTACCGAACGTAGGTT 383937 Query 22227 AGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCA 22286 |||| ||| | || | ||| || ||| || || ||| ||||||| || || |||| Sbjct 383936 GCTCCAGGTAAATGTTTAGCGATTGCGACTGGTCAATGAACACTCCTCGGTCAGCAGCCA 383877 Query 22287 TATTTATCAATGTACGCATCGAC-ATTTCCCATACGGTCTTGTACAGTTGCCTGATCT-C 22344 | | || |||| | | || |||||||| |||||||| || | | |||| | | Sbjct 383876 TGTCGAT-AATGGTCTTTTGTTTGATCTCCCATACCGTCTTGTAAAGATCCTTGATGTGC 383818 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTT---T 22401 | | || || || || | | ||| || ||||| || | |||| | Sbjct 383817 TGAGGG-ATACCCTCAATGTGTCGTAAGGATCC---ATTGTAAGCAATAAGTTTTTCCTT 383762 Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461 || | || | ||| | || | | | | || | || ||| ||||||| || Sbjct 383761 CATGCTCTCATCCCAGAGTCCCAGGTCCACAAGGTCGCGCAGCAAGTGAGGGTTCACAAC 383702 Query 22462 TTGAAACTCGCCGGAC-AAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 ||||||||| || ||| || || || | ||| || ||| ||| | ||||||||| Sbjct 383701 GAAAAACTCGCC--ACTAAGCACACGCCGATAGTAGATATTGCTCGTGTAAGGTTCGAAA 383644 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 || || ||||||||||| ||||| | ||||| || || |||||||| ||||| | ||| Sbjct 383643 GACTCGTTGTTTCCCAGAATCTGTGACGTCGATGCCGTGGGCATCGGGGCCAAGAATAGT 383584 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACC-AGTCCCACAG 22635 ||||| | ||||||||| || | || || |||||| |||| || |||||||||| Sbjct 383583 GAGTTGCGCAAGCCGTGTTTGGCCATGCGACGCTTGAG-ATCGTCCCAGTCCCACAG 383528 >seq1 Length=768689 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| | || || ||||| ||||| | || || || || Sbjct 683861 ATGCAGATTTTCGTGAAGACCTTAACGGGTAAAACCATCACTTTGGAGGTGGAGCCCAGT 683920 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || || | || |||||||| || | || || |||||| Sbjct 683921 GACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCAG 683980 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || ||||||||||| || | || || | || || || || || Sbjct 683981 CAGCGTTTGATTTTCGCTGGCAAGCAACTTGAGGATGGTCGTACATTGTCTGACTACAAT 684040 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||| ||||||||| |||| ||| | |||||||| |||| Sbjct 684041 ATTCAGAAAGAAAGTACTCTTCATTTGGTTCTTCGTCTGAGGGGTGGTA 684089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765202002800