Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq37 152 6e-32 seq207 102 1e-16 >seq37 Length=429747 Score = 152 bits (168), Expect = 6e-32 Identities = 460/700 (66%), Gaps = 8/700 (1%) Strand=Plus/Minus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCA-ATCTAGGACATTCATCCGGACACATCAACGA 63247 ||||| ||||| |||||||||| | | | || || |||||||| || ||||| | | Sbjct 382893 TCGAATTCGTCACCCCAAACATCATATAGACCTCGG-CATTCATCTGGGCACATAAGTGT 382835 Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63306 ||| || ||| ||| |||| ||||| || |||||||| ||||| | || ||| | Sbjct 382834 CCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATCCATAATGC-ATAGA 382776 Query 63307 ATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63366 | | |||||| | || ||| || ||| ||| || || || | ||| ||| Sbjct 382775 ACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGGTCCAAGAAATCCA 382716 Query 63367 TAATATCAGAATGCCACGGTTCCAAGTATATGGC-CATAACTCCAGGCCGTTTGTTTCCT 63425 | ||||||| ||||| ||||||||||||||||| | || || | ||||| || Sbjct 382715 TGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTG-CGTTTCCCACCA 382657 Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485 || ||||||| ||||| || || ||| ||| | |||||| || | ||||||||| Sbjct 382656 CCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGCAACATAGGTACAATACCGTTG 382597 Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGA 63545 | |||| || |||||| || || | ||||| || | || || || | | Sbjct 382596 CTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCCTGATTTTGTGGCATGCCAAA 382537 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605 ||||| || || || ||| ||| ||||||||| || | || || ||| | || || Sbjct 382536 CCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAAGGTATCAAATATTCCA 382477 Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665 | | | ||||| |||| | |||| || || || |||||||| | | | || Sbjct 382476 GCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTTGACATTTGTGGTCTTGGTGTC 382417 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725 || | || | || || | || || || || |||||| | | || | || Sbjct 382416 CCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAAATATTTTTGACTCATGAGGTGATAA 382357 Query 63726 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63785 |||| || | | || || || | ||| || ||| ||| || |||||||||||| Sbjct 382356 GTCTGTATTGTTCGTTCAATGTCACCACAATGTATCCCTGCTGACACCCGCATTAACATG 382297 Query 63786 TGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63845 || || ||||||||| || ||| | ||| || | | ||| || | ||||| ||| Sbjct 382296 TGTTGTGGTCTTTCAGAAACTTTATCGTTAATGCGTAGAAGGTATGACCTCTCCAATGTT 382237 Query 63846 TTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAA 63884 || | ||||||||| | ||| || ||| |||| | |||| Sbjct 382236 TTCAGACCAAAATAATCGTACTGGAAA-TCTCTTGTGTAA 382198 >seq207 Length=758373 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 34049 |||||||||||||| ||||| |||| ||| || |||| | | ||| | || || ||||| Sbjct 377601 CTGGCTGCAAAAAAGGCCAAGACATTTTTGATGAAATGTGTCTCGCCAGGAGTGAGTTTT 377542 Query 34050 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 34109 | |||||| || | ||| |||| |||| |||||| | ||||||||||| |||| | Sbjct 377541 TCCCAATCCTTTAAGTCTGCTGATAAGTCCAATTCTTCAGCAGTCCAAAATGACGCCTGT 377482 Query 34110 GCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGG 34150 || || || ||| | ||||| |||| | || | ||| || Sbjct 377481 GCTTTCTTGTACCACTCCCAGAAGTCAGGGTACTTGATCGG 377441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815907365200