Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq37 154 1e-32 >seq37 Length=429747 Score = 154 bits (170), Expect = 1e-32 Identities = 439/665 (66%), Gaps = 10/665 (2%) Strand=Plus/Minus Query 37951 CCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCT 38010 ||||| ||||| ||| ||| | ||||| ||| ||||| || | ||| || | | | Sbjct 382881 CCCCAAACATCATATAGACCTCGGCATTCATCTGGGCACATAAGTGTCCAGTCAGCGTTT 382822 Query 38011 TTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTT 38070 || || | | ||| || | |||||||| |||||||||| || |||||| | | Sbjct 382821 GCCTCAACTCTCTTCATGAACAGATCAGGTATCCATAATGCATAGAACAAATCTCTAGCC 382762 Query 38071 CTATATTCTTC-GTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTG 38129 || |||||| | ||| | ||| || | || | | ||||| | ||||||||||| Sbjct 382761 CTTGCTTCTTCAGCTCCGTG-ATTTTTACGTAGGTCCAAGAAATCCATGATATCAGCGTG 382703 Query 38130 CCATGGTTCTATATAAATCGACATTG-CTCCTGGTCTTTTATCACCTCCCTGATTAATAT 38188 ||||||||| | || || | | | | ||| | | ||| |||| || |||| | || Sbjct 382702 CCATGGTTCCAAGTATATGGCAAACGACCCCTTG-CGTTTCCCACCACCTTGATCTACAT 382644 Query 38189 ATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTA 38248 |||| | || ||| | || | ||||||||||| ||||| || ||| |||||| Sbjct 382643 ATCTTGCAGTAGCATTGAAAATACGCAACATAGGTACAATACCGTTGCTTTTACCGTTTG 382584 Query 38249 TACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTG 38308 ||||| || |||| ||| | || | || || | ||| ||||| || || | Sbjct 382583 TACCGCGAATGTAAGCACCACTTGCCCTGATTTTGTGGCATGCCAAACCTATACCTCCAG 382524 Query 38309 CATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCAT 38368 || ||| || || ||||||||| | || ||||||||||| || | | ||||| Sbjct 382523 CACATTTGCTGATGAATGCGCATTGTGTCAAGGTATCAAATATTCCAGCCAGGGAGTCAT 382464 Query 38369 CCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATA 38428 | || || |||| || ||||| |||||||| || ||| || || | | || | Sbjct 382463 CTTTCATATCCAGTAAGAAGCAACTTGACATTTGTGGTCTTGGTGTCCCTGAGAAGAAGA 382404 Query 38429 ATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA--TTATATGTTTCTATTAC 38486 ||| || | ||||| |||| |||||| ||| || | | ||| || | |||| Sbjct 382403 GTGTTGGCGTCGCATGAGTGAAATATTTTT--GACTCATGAGGTGATAAGTCTGTATTGT 382346 Query 38487 ATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCT 38546 || || ||||| | || || ||| || |||| ||||| ||| ||||||||||| Sbjct 382345 TCGTTCAATGTCACCACAATGTATCCCTGCTGACACCCGCATTAACATGTGTTGTGGTCT 382286 Query 38547 TTCTATTATTTTATTATT-CTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 ||| | ||||| || || | || || || || | || |||||||| | |||| Sbjct 382285 TTCAGAAACTTTATCGTTAATGCGT-AGAAGGTATGACCTCTCCAATGTTTTCAGACCAA 382227 Query 38606 AATAA 38610 ||||| Sbjct 382226 AATAA 382222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468523540839600