Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq37 141 1e-28 seq207 96.9 5e-15 >seq37 Length=429747 Score = 141 bits (156), Expect = 1e-28 Identities = 472/723 (65%), Gaps = 10/723 (1%) Strand=Plus/Minus Query 79839 TTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACA 79898 ||| |||| ||| || | | ||||| ||||| ||||||||||| | || || | || Sbjct 382915 TTCATATTTTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCGGCA 382856 Query 79899 TTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATC 79958 ||| || || ||||| | | ||| || | | ||| |||| ||||| || ||||| Sbjct 382855 TTCATCTGGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATC 382796 Query 79959 AGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCT-CGTTTCCTGTATTC 80016 ||| ||||| | || ||| || | |||||| | || |||| || | ||| ||| Sbjct 382795 AGGTATCCATAATGC-ATAGAACAAATCTCTAGCCCT-TGCTTCTTCAGCTCCGTGATTT 382738 Query 80017 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 80076 || || || | ||| |||| ||||||| ||||| ||||||||||||||||| | Sbjct 382737 TTACGTAGGTCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAAC 382678 Query 80077 ACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 80136 ||| ||||| || || ||||||| ||||| || || ||| ||| | | Sbjct 382677 GACCCCTTGCGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGC 382618 Query 80137 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 80196 ||||| || | |||||| ||| | |||| || || ||| || || ||||| || Sbjct 382617 AACATAGGTACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCC 382558 Query 80197 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 80256 | || || || | |||||| || || || ||| ||| ||||||||| || Sbjct 382557 CTGATTTTGTGGCATGCCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGT 382498 Query 80257 TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316 | || |||||| | || || | | | ||||| |||| | |||| || || || Sbjct 382497 GTCAAGGTATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTT 382438 Query 80317 GACATTTGGTGACGACTAGT-TCCCGCATTA-AATAAGGTAGGAGAAGCGTGCGTAAACC 80374 |||||||| | | | || |||| | | || | || || | || || || || Sbjct 382437 GACATTTGTGGTC--TTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAAAT 382380 Query 80375 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTC 80434 |||||| | || || | || |||| || | | ||| || || | ||| || | Sbjct 382379 ATTTTTGACTCATGAGGTGATAAGTCTGTATTGTTCGTTCAATGTCACCACAATGTATCC 382320 Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 80494 || | | || |||||||||||||| || ||||||||| | || | || || | Sbjct 382319 CTGCTGACACCCGCATTAACATGTGTTGTGGTCTTTCAGAAACTTTATCGTTAATGCGTA 382260 Query 80495 ACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCG 80553 | ||| || | ||||| ||||| | ||||||||| | ||| || ||| |||| | | Sbjct 382259 GAAGGTATGACCTCTCCAATGTTTTCAGACCAAAATAATCGTACTGGAAA-TCTCTTGTG 382201 Query 80554 TAA 80556 ||| Sbjct 382200 TAA 382198 >seq207 Length=758373 Score = 96.9 bits (106), Expect = 5e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTA 50427 |||||||||||||| ||||| |||| ||| || |||||| | ||| || || ||||| Sbjct 377601 CTGGCTGCAAAAAAGGCCAAGACATTTTTGATGAAATGTGTCTCGCCAGGAGTGAGTTTT 377542 Query 50428 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 50487 | |||||| || | ||| |||| || | |||||| | ||||||||||| |||| | Sbjct 377541 TCCCAATCCTTTAAGTCTGCTGATAAGTCCAATTCTTCAGCAGTCCAAAATGACGCCTGT 377482 Query 50488 GCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGG 50528 || || || ||| | ||||| |||| | || | ||| || Sbjct 377481 GCTTTCTTGTACCACTCCCAGAAGTCAGGGTACTTGATCGG 377441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266869652600