Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq37 127 3e-24 >seq37 Length=429747 Score = 127 bits (140), Expect = 3e-24 Identities = 469/723 (65%), Gaps = 10/723 (1%) Strand=Plus/Minus Query 71922 TTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACA 71981 ||| |||| ||| || | | ||||| ||||| |||||| ||| | || || | || Sbjct 382915 TTCATATTTTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCGGCA 382856 Query 71982 TTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATC 72041 ||||| || ||||| | || ||| || | | | | |||| ||||| || ||||| Sbjct 382855 TTCATCTGGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATC 382796 Query 72042 AGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCT-CGTTTCCTGTATTC 72099 ||| ||||| | || ||| || | |||||| | || |||| || | ||| ||| Sbjct 382795 AGGTATCCATAATGC-ATAGAACAAATCTCTAGCCCT-TGCTTCTTCAGCTCCGTGATTT 382738 Query 72100 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 72159 || || || | ||| |||| ||||||| ||||| ||||||||||||||||| | Sbjct 382737 TTACGTAGGTCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAAC 382678 Query 72160 ACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 72219 ||| ||||| || || ||||||| ||||| || || ||| ||| | | Sbjct 382677 GACCCCTTGCGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGC 382618 Query 72220 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 72279 ||||| || | |||||| ||| | ||| || || ||| || || ||||| || Sbjct 382617 AACATAGGTACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCC 382558 Query 72280 CGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 72339 | || ||| || | |||||| || || || ||| ||| ||||||||| || Sbjct 382557 CTGATTTTGTGGCATGCCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGT 382498 Query 72340 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 72399 | || |||||| | || || | | ||||| |||| | |||| || || || Sbjct 382497 GTCAAGGTATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTT 382438 Query 72400 GACATTTGGTGACGACTAGT-TCCCGCATTA-AATAAGGTAGGAGAAGCGTGCGTAAACC 72457 |||||||| | | | || |||| | | || | || || | || || || || Sbjct 382437 GACATTTGTGGTC--TTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAAAT 382380 Query 72458 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTC 72517 |||||| | || || | || |||| || | | ||| || || | |||||| | Sbjct 382379 ATTTTTGACTCATGAGGTGATAAGTCTGTATTGTTCGTTCAATGTCACCACAATGTATCC 382320 Query 72518 CTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 72577 || | | || ||||||||||| || || ||||||||| | || | || || | Sbjct 382319 CTGCTGACACCCGCATTAACATGTGTTGTGGTCTTTCAGAAACTTTATCGTTAATGCGTA 382260 Query 72578 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCG 72636 | ||| || | ||||| ||||| | ||||||||| | ||| || ||| |||| | | Sbjct 382259 GAAGGTATGACCTCTCCAATGTTTTCAGACCAAAATAATCGTACTGGAAA-TCTCTTGTG 382201 Query 72637 TAA 72639 ||| Sbjct 382200 TAA 382198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137396313400