Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq207 129 1e-24 seq1 127 5e-24 >seq207 Length=758373 Score = 129 bits (142), Expect = 1e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 ||||||||||| || |||||||| || || | |||||| || || || |||||||| ||| Sbjct 499380 TCTTTCTGAATGTTGTAGTCAGAGAGTGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAA 499321 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | |||||| || || || || || ||||| ||||| |||||||| || || ||| Sbjct 499320 ATCAAACGCTGTTGGTCTGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTT 499261 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACC 104532 || | || || || ||||||||||| | ||| || || ||||| Sbjct 499260 TCGATAGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTTACC 499217 Score = 123 bits (136), Expect = 6e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||| | || | ||| |||||||||||| || |||||||| || || | || || Sbjct 499666 AAGTACCAAGTGAAGGGTACTTTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGGCCATC 499607 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| ||||| || || || || || || | || ||||| || || || || ||||| || Sbjct 499606 TTCAAGTTGCTTCCCCGCGAAGATAAGACGTTGCTGATCTGGGGGAATACCCTCTTTGTC 499547 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| |||||||| || ||||| || | ||| || || ||||||||||| | ||| || || Sbjct 499546 CTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGTTCTACCTCCAATGTGATGGT 499487 Query 104527 CTTACC 104532 ||||| Sbjct 499486 TTTACC 499481 >seq1 Length=768689 Score = 127 bits (140), Expect = 5e-24 Identities = 179/250 (72%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | ||| | ||| ||||||||||||||| |||||| Sbjct 684090 ATACCACCCCTCAGACGAAGAACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCA 684031 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | ||| || || ||||| || ||||| ||||| | | ||| || || ||| Sbjct 684030 GACAATGTACGACCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGA 683971 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || || || ||||| || || |||||||| | ||| || || || || Sbjct 683970 GGGATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCC 683911 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACA 104569 ||||| | || || || ||||| || | || || || || |||||||| || |||| Sbjct 683910 ACCTCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTGCATAGTGCCTACA 683851 Query 104570 GTATTTATTA 104579 || ||||| Sbjct 683850 -AATATATTA 683842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395228257220