Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq207 113 4e-20 >seq207 Length=758373 Score = 113 bits (124), Expect = 4e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||| ||||| || | |||||| || | ||| ||| || || | Sbjct 499165 AAAAATTTGCATACCTCCCCTCAAACGAAGCACCAAATGAAGGGTACTTTCTTTCTGGAT 499106 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| || || | ||||| | |||||| |||||||| ||| | || || || | | Sbjct 499105 GTTGTAGTCAG--AGAGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAAATCAAACGT 499048 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||||||||| |||||||| |||||||| | || |||||||||||| ||| |||| Sbjct 499047 TGCTGATCTGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTG 498988 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCC 94980 ||| | | || || || | ||||| ||||| || Sbjct 498987 TCACTGGGCTCCACCTCTAAGGTGATAGTTTTACC 498953 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||| ||||| || | ||||| || | || || || || | Sbjct 499429 AAAAATTTGCATACCTCCCCTCAAACGAAGTACCAAATGAAGGGTGCTCTCTTTCTGAAT 499370 Query 94828 GTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| || || | ||||| || ||||| ||||| ||||| | || || || | Sbjct 499369 GTTGTAGTCAG--AGAGTGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGC 499312 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || || ||||| |||||||| |||||||| | || |||||||||||| ||| |||| Sbjct 499311 TGTTGGTCTGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTG 499252 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCC 94980 ||| | | || || || | ||||||||||| || Sbjct 499251 TCACTGGGTTCTACCTCCAATGTGATGGTTTTACC 499217 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| ||||| || | |||||||| | ||| ||| || || | ||| || || Sbjct 499680 CCTCCCCTCAAGCGAAGTACCAAGTGAAGGGTACTTTCTTTCTGAATGTTGTAGTCAG-- 499623 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||||| | ||| || || || || || | ||||| | | |||||||||||| | Sbjct 499622 AGAGTGTACGGCCATCTTCAAGTTGCTTCCCCGCGAAGATAAGACGTTGCTGATCTGGGG 499563 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 ||||||| |||||||| | || ||||||||||| ||| |||||| | | || | Sbjct 499562 GAATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGTTCTA 499503 Query 94959 CGTCAATCGTGATGGTTTTTCC 94980 | || | ||||||||||| || Sbjct 499502 CCTCCAATGTGATGGTTTTACC 499481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289995217400