Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq69 127 1e-24 seq1 111 1e-19 seq207 104 2e-17 >seq69 Length=96881 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| |||||||||| | |||||||| || |||||||| Sbjct 78514 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATGGCAGATAGGGACAGTGGGAATCTCGT 78455 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 78454 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 78420 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||| ||| ||| ||||||| |||||||||||||||||||| |||||||||||| | Sbjct 76533 CTCTTGTCAGAGTACTTTTCATCTTTCCCTCACGGTACTTGTAAGCTATCGGTCTCACAC 76474 Query 20009 TAATATTTAGCCTTAT 20024 ||||||||| ||||| Sbjct 76473 GAATATTTAGTCTTAT 76458 >seq1 Length=768689 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| |||| ||| | |||||||||||||| || || || ||||||||||| |||| Sbjct 684089 TACCACCCCTCAGACGAAGAACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAG 684030 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || | ||| || || || || || | || || || || | | Sbjct 684029 ACAATGTACGACCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAG 683970 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || ||||| || || ||| ||||| | | || || | || | Sbjct 683969 GGATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCCA 683910 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || ||||||||||| ||||| |||||||| |||||||| Sbjct 683909 CCTCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTGCAT 683861 >seq207 Length=758373 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || |||||||| | ||||||||||| |||||||| || ||||| ||||| |||| Sbjct 499418 TACCTCCCCTCAAACGAAGTACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAG 499359 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| |||| || | || ||||| || || || | || ||||| || | || Sbjct 499358 AGAGTGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGG 499299 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||||||| || ||| ||| || || | || ||| || | ||| | Sbjct 499298 GAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTA 499239 Query 38269 CTTCTAATGTAATAGTTTTACC 38290 | || ||||| || |||||||| Sbjct 499238 CCTCCAATGTGATGGTTTTACC 499217 Score = 98.7 bits (108), Expect = 7e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || |||||||| | |||||||||||| || || || || || || ||||| |||| Sbjct 499154 TACCTCCCCTCAAACGAAGCACCAAATGAAGGGTACTTTCTTTCTGGATGTTGTAGTCAG 499095 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || || | ||||| ||||| || || | ||||| ||||| | || Sbjct 499094 AGAGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAAATCAAACGTTGCTGATCTGGGG 499035 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||||||| || ||| ||| || || | || ||| || | || | Sbjct 499034 GAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGCTCCA 498975 Query 38269 CTTCTAATGTAATAGTTTTACC 38290 | ||||| || ||||||||||| Sbjct 498974 CCTCTAAGGTGATAGTTTTACC 498953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946322333665