Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq37 138 1e-27 seq207 102 1e-16 >seq37 Length=429747 Score = 138 bits (152), Expect = 1e-27 Identities = 458/701 (65%), Gaps = 10/701 (1%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||| ||||| |||||||||| | || || | |||||||| || ||||| | | | Sbjct 382893 TCGAATTCGTCACCCCAAACATCATATAGACCTCGGCATTCATCTGGGCACATAAGTGTC 382834 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111 || || ||| ||| |||| ||||| || |||||||| ||||| | || ||| || Sbjct 382833 CAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATCCATAATGC-ATAGAA 382775 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 | |||||| | || ||| || ||| ||| || || || | ||| |||| Sbjct 382774 CAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGGTCCAAGAAATCCAT 382715 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGC-CATAACTCCAGGCCGTTTGTTTCCTC 63230 ||||||| ||||| ||||||||||||||||| | || || | ||||| || | Sbjct 382714 GATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTG-CGTTTCCCACCAC 382656 Query 63231 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 63290 | ||||||| ||||| || || ||| ||| | |||||| || | |||||| ||| Sbjct 382655 CTTGATCTACATATCTTGCAGTAGCATTGAAAATACGCAACATAGGTACAATACCGTTGC 382596 Query 63291 ATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGAC 63350 | |||| || || || || || ||||| || | || || || | || Sbjct 382595 TTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCCTGATTTTGTGGCATGCCAAAC 382536 Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 63410 |||| || || || ||| ||| ||||||||| || | || |||||| | || || Sbjct 382535 CTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAAGGTATCAAATATTCCAG 382476 Query 63411 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT-T 63469 | | ||||| |||| | |||| || || || |||||||| | | | || | Sbjct 382475 CCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTTGACATTTGTGGTC--TTGGTGT 382418 Query 63470 CCCGCATTA-AATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTA 63528 ||| | | || | || || | || ||||| || |||||| | | || | || Sbjct 382417 CCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAAATATTTTTGACTCATGAGGTGATA 382358 Query 63529 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63588 |||| || | | || || || | ||| || ||| ||| || ||||||||||| Sbjct 382357 AGTCTGTATTGTTCGTTCAATGTCACCACAATGTATCCCTGCTGACACCCGCATTAACAT 382298 Query 63589 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63648 ||| || ||||||||| | || | ||| || | | ||| || | ||||| || Sbjct 382297 GTGTTGTGGTCTTTCAGAAACTTTATCGTTAATGCGTAGAAGGTATGACCTCTCCAATGT 382238 Query 63649 TTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAA 63688 ||| | ||||||||| | ||| || ||| |||| | |||| Sbjct 382237 TTTCAGACCAAAATAATCGTACTGGAAA-TCTCTTGTGTAA 382198 >seq207 Length=758373 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 33128 |||||||||||||| ||||| |||| ||| || |||| | | ||| | || || ||||| Sbjct 377601 CTGGCTGCAAAAAAGGCCAAGACATTTTTGATGAAATGTGTCTCGCCAGGAGTGAGTTTT 377542 Query 33129 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 33188 | |||||| || | ||| |||| |||| |||||| | ||||||||||| |||| | Sbjct 377541 TCCCAATCCTTTAAGTCTGCTGATAAGTCCAATTCTTCAGCAGTCCAAAATGACGCCTGT 377482 Query 33189 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAA 33234 || || || ||| | ||||| |||| | || | || ||| ||| Sbjct 377481 GCTTTCTTGTACCACTCCCAGAAGTCAGGGTACTTGATCGGATAAA 377436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630297114000