Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 seq207 82.4 7e-11 >seq1 Length=768689 Score = 102 bits (112), Expect = 7e-17 Identities = 168/241 (70%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 || || ||||| || || || ||||| || || |||||| ||||||| | || |||||| Sbjct 683855 GGCACTATGCAGATTTTCGTGAAGACCTTAACGGGTAAAACCATCACTTTGGAGGTGGAG 683914 Query 25053 TCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 | |||||| || || | ||| || ||| ||||| || || || || || Sbjct 683915 CCCAGTGACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCG 683974 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 ||||| ||||| | ||||| || ||||| ||| | || |||| ||| || || || Sbjct 683975 GACCAGCAGCGTTTGATTTTCGCTGGCAAGCAACTTGAGGATGGTCGTACATTGTCTGAC 684034 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTAT 25232 ||||||||||| |||||| || || ||||| || || | || || || || ||||| Sbjct 684035 TACAATATTCAGAAAGAAAGTACTCTTCATTTGGTTCTTCGTCTGAGGGGTGG-TATTAT 684093 Query 25233 T 25233 | Sbjct 684094 T 684094 >seq207 Length=758373 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAA 25085 |||||| |||||||| | || || || | |||||||||||| | ||| ||| Sbjct 499217 GGTAAAACCATCACATTGGAGGTAGAACCCAGTGACACTATCGAAAACGTCAAGGCAAAG 499276 Query 25086 ATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAA 25145 ||| |||||||| || ||||| || ||||||||||| | ||||| || || || || Sbjct 499277 ATCCAGGACAAAGAGGGTATTCCCCCAGACCAACAGCGTTTGATTTTCGCTGGAAAGCAG 499336 Query 25146 TTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTA 25205 | || || | ||| || | || ||||| ||||| ||||| ||| || ||||| Sbjct 499337 CTTGAGGACGGTCGTACACTCTCTGACTACAACATTCAGAAAGAGAGCACCCTTCATTTG 499396 Query 25206 GTGCT 25210 || || Sbjct 499397 GTACT 499401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326864545225