Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq207 111 1e-19 seq1 111 1e-19 >seq207 Length=758373 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| |||| | || ||||| ||| || || | || | |||| ||| Sbjct 498953 GGTAAAACTATCACCTTAGAGGTGGAGCCCAGTGACACTATCGAAAACGTCAAGGCAAAG 499012 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || ||||| ||||||||||| || ||||| |||||| | || || ||||| |||||| Sbjct 499013 ATCCAGGACAAAGAGGGTATTCCCCCAGATCAGCAACGTTTGATTTTCGCCGGTAAACAG 499072 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | |||||| ||| || |||| || |||||||| || |||||| ||| | ||||| Sbjct 499073 CTCGAGGATGGCCGTACACTCTCTGACTACAACATCCAGAAAGAAAGTACCCTTCATTTG 499132 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || | || ||| | |||||| Sbjct 499133 GTGCTTCGTTTGAGGGGAGGT 499153 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| |||| | || || ||| ||| || ||| | || || |||| ||| Sbjct 499481 GGTAAAACCATCACATTGGAGGTAGAACCCAGTGACACCATCGAGAATGTCAAGGCAAAG 499540 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || ||||| ||||||||||| || ||||| ||||||||||| || || || || || Sbjct 499541 ATCCAGGACAAAGAGGGTATTCCCCCAGATCAGCAACGTCTTATCTTCGCGGGGAAGCAA 499600 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| ||| || |||| || ||||||||||| |||||| ||| | || || Sbjct 499601 CTTGAAGATGGCCGTACACTCTCTGACTACAACATTCAGAAAGAAAGTACCCTTCACTTG 499660 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || | || ||| | |||||| Sbjct 499661 GTACTTCGCTTGAGGGGAGGT 499681 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| |||| | || || ||| ||| || || | || | |||| ||| Sbjct 499217 GGTAAAACCATCACATTGGAGGTAGAACCCAGTGACACTATCGAAAACGTCAAGGCAAAG 499276 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || ||||| ||||||||||| || || ||||| ||| | || || || || || ||| Sbjct 499277 ATCCAGGACAAAGAGGGTATTCCCCCAGACCAACAGCGTTTGATTTTCGCTGGAAAGCAG 499336 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | ||||| || || |||| || ||||||||||| ||||| |||| | ||||| Sbjct 499337 CTTGAGGACGGTCGTACACTCTCTGACTACAACATTCAGAAAGAGAGCACCCTTCATTTG 499396 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || | || ||| | |||||| Sbjct 499397 GTACTTCGTTTGAGGGGAGGT 499417 >seq1 Length=768689 Score = 111 bits (122), Expect = 1e-19 Identities = 176/252 (70%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 22201 TTTTATACATTTGTA---AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTC 22257 ||| ||| ||||||| | ||||| ||||| || || || ||||| |||||||| || Sbjct 683840 TTTAATATATTTGTAGGCACTATGCAGATTTTCGTGAAGACCTTAACGGGTAAAACCATC 683899 Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 ||| | || ||||| ||| || ||| | || || | || || || ||||||||| Sbjct 683900 ACTTTGGAGGTGGAGCCCAGTGACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAG 683959 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377 |||||||| || || || || || ||| | || || || ||||| || | |||||| Sbjct 683960 GAGGGTATCCCTCCGGACCAGCAGCGTTTGATTTTCGCTGGCAAGCAACTTGAGGATGGT 684019 Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTG 22437 || || | || || ||||| ||||| |||||| || | ||||| ||| | || || Sbjct 684020 CGTACATTGTCTGACTACAATATTCAGAAAGAAAGTACTCTTCATTTGGTTCTTCGTCTG 684079 Query 22438 CGCGGAGGTTTT 22449 | || ||| || Sbjct 684080 AGGGGTGGTATT 684091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726900181475