Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq207 145 1e-29 seq1 116 7e-21 >seq207 Length=758373 Score = 145 bits (160), Expect = 1e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | | ||| | ||||||||| || || ||||| || ||||| || || ||| Sbjct 499680 CCTCCCCTCAAGCGAAGTACCAAGTGAAGGGTACTTTCTTTCTGAATGTTGTAGTCAGAG 499621 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | |||||||| ||||| || || | ||| || || || ||| Sbjct 499620 AGTGTACGGCCATCTTCAAGTTGCTTCCCCGCGAAGATAAGACGTTGCTGATCTGGGGGA 499561 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| || |||||||||||||| |||||||||||| | |||||| Sbjct 499560 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGTTCTACC 499501 Query 68415 TCCAAGGTGATGGTTTTTCC 68434 ||||| ||||||||||| || Sbjct 499500 TCCAATGTGATGGTTTTACC 499481 Score = 132 bits (146), Expect = 9e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 |||||| || || ||| |||||| || ||||| || || |||||||| | || || || Sbjct 499399 TACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGACCGTCCTC 499340 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | |||||| || ||||| || | | |||||||| || ||||| || || ||||| || Sbjct 499339 AAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCTTTGTCCTG 499280 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||||||||||||||| ||||| ||||| | |||||| ||||| ||||||||||| Sbjct 499279 GATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTT 499220 Query 68432 TCC 68434 || Sbjct 499219 ACC 499217 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || ||||| |||||||| || || |||||||| | ||||| || Sbjct 499134 ACCAAATGAAGGGTACTTTCTTTCTGGATGTTGTAGTCAGAGAGTGTACGGCCATCCTCG 499075 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || |||||||| || | | ||| || || || ||||| || || ||||| || Sbjct 499074 AGCTGTTTACCGGCGAAAATCAAACGTTGCTGATCTGGGGGAATACCCTCTTTGTCCTGG 499015 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||||||||||| ||||| ||||| | || || || |||||||| ||||| Sbjct 499014 ATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGCTCCACCTCTAAGGTGATAGTTTTA 498955 Query 68433 CC 68434 || Sbjct 498954 CC 498953 >seq1 Length=768689 Score = 116 bits (128), Expect = 7e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || ||||| || || || || || || | ||| | ||||| || Sbjct 684069 ACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGACAATGTACGACCATCCTCA 684010 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || ||||| || | | || ||||| || || || || ||||||||||| Sbjct 684009 AGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGG 683950 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || || |||||||| | || || ||||| ||||||||||| Sbjct 683949 ATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCCACCTCCAAAGTGATGGTTTTA 683890 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| | |||||| ||||| |||||||| Sbjct 683889 CCCGTTAAGGTCTTCACGAAAATCTGCAT 683861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619923139800