Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq37 224 1e-53 >seq37 Length=429747 Score = 224 bits (248), Expect = 1e-53 Identities = 848/1310 (65%), Gaps = 48/1310 (4%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||||||| ||||||| || || || |||| ||||| |||| || || | || || Sbjct 383670 TAGATATTGCTCGTGTAAGGTTCGAAAGACTCGTTGTTTCCCAGAATCTGTGACGTCGAT 383611 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || |||| || || ||| || | || | || ||||| | Sbjct 383610 GCCGTGGGCATCGGGGCCAAGAATAGTGAGTTGCGCAAGCCGTGTTTGGCCATGCGACGC 383551 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG------CCACATATCAAAC 114115 ||||| |||||||||| | || || | ||| || ||| | |||||| Sbjct 383550 TTGAGATCGTCCCAGTCCCAC---AGTTTGTTATCCACCGTAGCACCCCAGAGGTCAAAC 383494 Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC 114175 || || |||| | || || ||||| || | | | |||||||| || || | ||| Sbjct 383493 TGTAGTTTACCCTTCGAAGCAGGCGAACCTTGATAAGTCTCGTAGGGTCCATGTTTCTCA 383434 Query 114176 GCCAATTCGGAGCTCGCCTCG---AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232 |||||| ||| | | ||| || | | | || || || || || || ||| Sbjct 383433 GCCAAT---GAGATAGACTCATCCAGACATCCATAGTAGATGGTTTCGAAGATACGACGG 383377 Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 114292 || | | ||||||| || || || || || | | | || || || || || Sbjct 383376 TTTAATTCCTTGGCTTCTTCCGACTCGAAAGGGTACCTCATTAACATGAAAGTGTCAGCC 383317 Query 114293 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT--AGACTTTCGAGCGGTCT 114350 |||||||| || || | |||||||| | ||| | || ||||||| || || Sbjct 383316 AGACCTTGTACTCCAACACCAATTGGCCTATGGCGTTGGTTGGAGACTTT-----GGCCT 383262 Query 114351 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 114407 | || ||||| |||||| || || | ||| |||| || |||| || || Sbjct 383261 CTGGAACCGGATAGTAATTCCGGTCAATGATCCTGTTTAAGTTGAATGTGATGACACGTG 383202 Query 114408 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA 114467 | |||| || || | | |||| | | || ||||| | || |||||| |||| | Sbjct 383201 CCACATCATATAGTTTCTTGAAATCGTATGTTCGTGTCTCCTTGTTCACATACATAGGCA 383142 Query 114468 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 114527 | || || || |||| ||| || || | || || | |||||||| | ||||| Sbjct 383141 GCGCTATAGATGCCAAATTGCAGACTGCCACTTCCTCTGGAGAAGTGTACTGAACAATTT 383082 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | ||||| ||||| || ||||| || | |||| ||| ||||| || | ||| | Sbjct 383081 CACAACACAGGTTTGACGATTTTATGGTTCCAAGATTCTGTTGGTTTGATTTAGCGTTGC 383022 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA--GC 114645 | ||||| ||||| |||||| |||| | || || || ||||| ||| |||| || Sbjct 383021 AGGCATCTTTGTATAGCATGAATGGGTTGCCTGTTTCGATTTGG--CTTTGTAATATGGC 382964 Query 114646 CTTCCAGACA-TCGGCGGCTGGCACAGTGG--CGTTGGCTCGCCCCTCCTCCTCGTACTT 114702 ||| | | || | |||||| | || ||| || ||||| | | || || || Sbjct 382963 AAACCATAGAGTCTG-GGCTGGTATGGTTTTACGTC--CTAGCCCCGCTGCTTCATATTT 382907 Query 114703 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTG 114761 |||||| || || || || || |||||| | || | || ||| | || || ||||| Sbjct 382906 TGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCG-GCATTCATCTG 382848 Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 |||| | || | ||| | | | ||||||| | ||||||||| || || || |||| Sbjct 382847 GGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATCC 382788 Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 | | || |||| | ||| | | | ||||||||| | || ||||| ||| | | Sbjct 382787 ATAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGGT 382728 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 114941 |||| || ||||||||||| |||||||| ||||||| ||| | || | |||||||| | Sbjct 382727 CCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTGC 382668 Query 114942 G---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATT--AAATACGCGAAGCATTGG 114996 | | |||| | || | |||||| || || || ||||| |||||||| | ||| || Sbjct 382667 GTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGC--AACATAGG 382610 Query 114997 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 115056 | ||||| | || || ||||| || ||||| || | | || |||| | Sbjct 382609 TACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCCTGATTTT 382550 Query 115057 ATGG-ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 115115 ||| ||| || ||| ||||| || || || || ||| ||||| | || | Sbjct 382549 GTGGCATG-CCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAAGG 382491 Query 115116 TGCCGTAGATCCCGTCGATCGAGTCACCCTT-ATTTGCGATAAGGAAGCAGCTCGACATT 115174 | | | || || | | |||||| | || || | | ||| |||||| || |||||| Sbjct 382490 TATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAA-GAAGCAACTTGACATT 382432 Query 115175 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 ||||| |||||||| || | | |||||| ||||| ||||| || |||| Sbjct 382431 TGTGGTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAA 382382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351994612200