Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq207 105 7e-18 seq1 100 3e-16 >seq207 Length=758373 Score = 105 bits (116), Expect = 7e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || ||||| | |||||||| | |||||||| || ||||| ||||| |||| Sbjct 499417 ACCTCCCCTCAAACGAAGTACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGA 499358 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || |||| || |||||||| |||||||| || | ||||| ||||| | || Sbjct 499357 GAGTGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGG 499298 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| |||||| ||| ||| |||| | | | ||||| || | ||| || Sbjct 499297 AATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTAC 499238 Query 42161 ATCGACCGTGATGGTTTTGCC 42181 || | ||||||||||| || Sbjct 499237 CTCCAATGTGATGGTTTTACC 499217 >seq1 Length=768689 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | ||| | |||||||| | || || || || ||||||||||| |||| Sbjct 684088 ACCACCCCTCAGACGAAGAACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGA 684029 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || || ||||| |||||||| || | ||||||||||| | || Sbjct 684028 CAATGTACGACCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGG 683969 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||||||| ||| || || | | | | ||||| || | ||||| Sbjct 683968 GATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCCAC 683909 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||||||||| ||||||| ||||| || || || ||||| Sbjct 683908 CTCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTGCAT 683861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211340115600