Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq37 228 1e-54 seq86 84.2 3e-11 >seq37 Length=429747 Score = 228 bits (252), Expect = 1e-54 Identities = 851/1311 (65%), Gaps = 50/1311 (4%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||| ||| ||||||| || || || |||| ||||| |||| || || | || || Sbjct 383670 TAGATATTGCTCGTGTAAGGTTCGAAAGACTCGTTGTTTCCCAGAATCTGTGACGTCGAT 383611 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || |||||||| || |||| || || |||||| | || ||||| | Sbjct 383610 GCCGTGGGCATCGGGGCCAAGAATAGTGAGTTGCGCAAGCCGTGTTTGGCCATGCGACGC 383551 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT------CCCACATATCAAAC 116076 ||||| |||||||||| | || || | ||| || |||| | |||||| Sbjct 383550 TTGAGATCGTCCCAGTCCCAC---AGTTTGTTATCCACCGTAGCACCCCAGAGGTCAAAC 383494 Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136 || || |||| | || || ||||| || | | | ||||| || || || | ||| Sbjct 383493 TGTAGTTTACCCTTCGAAGCAGGCGAACCTTGATAAGTCTCGTAGGGTCCATGTTTCTCA 383434 Query 116137 GCCAATTCGGAGCTCGCCTCG---AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193 |||||| ||| | | ||| || | | | || || || || || || ||| Sbjct 383433 GCCAAT---GAGATAGACTCATCCAGACATCCATAGTAGATGGTTTCGAAGATACGACGG 383377 Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGC 116252 || | | ||||||| || || || || || | | || || || || || || || Sbjct 383376 TTTAATTCCTTGGCTTCTTCCGACTCGAAAGGGT-ACCTCATTAACATGAAAGTGTCAGC 383318 Query 116253 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT--AGACTTTCGAGCGGTC 116310 |||||||| || || | |||||||| | ||| | || ||||||| || | Sbjct 383317 CAGACCTTGTACTCCAACACCAATTGGCCTATGGCGTTGGTTGGAGACTTT-----GGCC 383263 Query 116311 TCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 116367 || || ||||| |||||| || || | ||| |||| || |||| || | Sbjct 383262 TCTGGAACCGGATAGTAATTCCGGTCAATGATCCTGTTTAAGTTGAATGTGATGACACGT 383203 Query 116368 GTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGA 116427 | | |||| || || | | |||| | | || ||||| | || |||||| |||| Sbjct 383202 GCCACATCATATAGTTTCTTGAAATCGTATGTTCGTGTCTCCTTGTTCACATACATAGGC 383143 Query 116428 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 116487 || || || || |||| ||| || || | || || | |||||||| | |||| Sbjct 383142 AGCGCTATAGATGCCAAATTGCAGACTGCCACTTCCTCTGGAGAAGTGTACTGAACAATT 383083 Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547 || ||||| ||||| || ||||| || | |||| ||| ||||| || | ||| Sbjct 383082 TCACAACACAGGTTTGACGATTTTATGGTTCCAAGATTCTGTTGGTTTGATTTAGCGTTG 383023 Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA--G 116605 || ||||| ||||| ||||| |||| | || || || ||||| ||| |||| | Sbjct 383022 CAGGCATCTTTGTATAGCATGAATGGGTTGCCTGTTTCGATTTGG--CTTTGTAATATGG 382965 Query 116606 CCTTCCATACA-TCGGCGGCTGGCACAGTGG--CGTTGGCTCGCCCCTCCTCCTCGTACT 116662 | ||||| | || | |||||| | || ||| || ||||| | | || || | Sbjct 382964 CAAACCATAGAGTCTG-GGCTGGTATGGTTTTACGTC--CTAGCCCCGCTGCTTCATATT 382908 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTT-ATCT 116721 ||||||| || ||||| || || |||||| | | || | || ||| | || || |||| Sbjct 382907 TTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCG-GCATTCATCT 382849 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 || || | || | ||| | | | ||||||| | ||||||||| || || || ||| Sbjct 382848 GGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATC 382789 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841 || | || |||| | ||| | | | ||||||||| | || ||||| ||| | Sbjct 382788 CATAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGG 382729 Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG 116901 ||||| || ||||||||||| |||||||| ||||||| ||| | || | ||||||||| Sbjct 382728 TCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTG 382669 Query 116902 CG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT--AAATACGCGAAGCATTG 116956 || | |||| | || | |||||| || || || || || |||||||| | ||| | Sbjct 382668 CGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGC--AACATAG 382611 Query 116957 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACA 117015 | | ||||| | || || ||||| || ||||| || || || || |||| Sbjct 382610 GTACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTT-GCCCTGATT 382552 Query 117016 TCGTGG-ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAG 117074 | |||| ||| || ||| ||||| || || || || ||| |||||| | || | Sbjct 382551 TTGTGGCATG-CCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAA 382493 Query 117075 ACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACAT 117134 | | | || ||| | | |||||| | || | | | | |||||| || ||||| Sbjct 382492 GGTATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTTGACAT 382433 Query 117135 TTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 |||||| |||||||| || | | |||||| ||||| ||||| || |||| Sbjct 382432 TTGTGGTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAA 382382 >seq86 Length=883075 Score = 84.2 bits (92), Expect = 3e-11 Identities = 113/155 (73%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 176828 AGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGC-AACTGCGAGGGT 176886 || || |||||||| || | || |||||||| || ||||||||||| || || ||| Sbjct 115655 AGTGGAAACACACCATAATTGTCTCGACCAACAACTGAGAGACCAGCTAAACATGA-GGT 115597 Query 176887 CTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGC 176946 ||| || || || ||||| |||| ||||| ||||| | | | || || || || Sbjct 115596 CTTGGCAGAGTCTCCCTCTGTCAATATGAGAGTACATTCACGGGCATGACGAGTACCTGC 115537 Query 176947 CTTGTTCGCATCGTCCAACTTGGGAATACCAGTAA 176981 |||||| ||||| || ||||| || || ||||||| Sbjct 115536 CTTGTTAGCATCTTCTAACTTAGGGATCCCAGTAA 115502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505551199400