Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq37 111 3e-19 >seq37 Length=429747 Score = 111 bits (122), Expect = 3e-19 Identities = 289/438 (66%), Gaps = 2/438 (0%) Strand=Plus/Minus Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 |||||||| || ||||||| ||| ||||| | ||||||| || ||||| | | | Sbjct 384000 CCGGTCTTAAGACCCTTCTTCCATCCGTAAAAGTGCATGCTAGTAAGTTTACCGAACGTA 383941 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 || | ||| || |||||| || || || ||||| ||||| | || || || Sbjct 383940 GGTTGCTCCAGGTAAATGTTTAGCGATTGCGACTGGTCAATGAACACTCCTCGGTCAGCA 383881 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | |||||||||||| || |||||||| ||||||||| | | || || || Sbjct 383880 GCCATGTCGATAATGGTCTTTTGTTTGATCTCCCATACCGTCTTGTAAAGATCCTTGATG 383821 Query 204077 TGTTGAGGCACATCTTCCCACGT-CCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 || ||||| | | | | | | || | | || || |||| || || ||| | | | Sbjct 383820 TGCTGAGGGATACCCT-CAATGTGTCGTAAGGATCCATTGTAAGCAATAAGTTTTTCCTT 383762 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | | ||| |||| | |||| | || || |||| || ||| ||||| | | Sbjct 383761 CATGCTCTCATCCCAGAGTCCCAGGTCCACAAGGTCGCGCAGCAAGTGAGGGTTCACAAC 383702 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || || ||||| | || | | | ||| | ||| | |||||||| | Sbjct 383701 GAAAAACTCGCCACTAAGCACACGCCGATAGTAGATATTGCTCGTGTAAGGTTCGAAAGA 383642 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||||||||| || | |||||| | || ||||||||||| || |||| || || || Sbjct 383641 CTCGTTGTTTCCCAGAATCTGTGACGTCGATGCCGTGGGCATCGGGGCCAAGAATAGTGA 383582 Query 204316 GTTGCGCACACCGTATTT 204333 |||||||| |||| ||| Sbjct 383581 GTTGCGCAAGCCGTGTTT 383564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153063020400