Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq207 100 7e-16 seq1 96.9 8e-15 >seq207 Length=758373 Score = 100 bits (110), Expect = 7e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 ||| || || | ||||||||||| | || | || || || ||||||||||| ||||| Sbjct 499381 CTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGACCGTCCTCAAGCTGCTTTCCAGCGAA 499322 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 || | |||||| ||||| || ||| || ||| ||||| |||||| ||| ||| Sbjct 499321 AATCAAACGCTGTTGGTCTGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTT 499262 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACC 199602 ||||| ||||| | | |||||| ||||| ||||| || ||||| Sbjct 499261 TTCGATAGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTTACC 499217 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || || || | ||||||||||| | || | |||||||| || ||||| || |||||| Sbjct 499644 TCTTTCTGAATGTTGTAGTCAGAGAGTGTACGGCCATCTTCAAGTTGCTTCCCCGCGAAG 499585 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || ||||| ||||| || || ||| || ||| ||||| |||||| ||| || Sbjct 499584 ATAAGACGTTGCTGATCTGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTC 499525 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACC 199602 |||| |||||| | | |||||| ||||| ||||| || ||||| Sbjct 499524 TCGATGGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTTACC 499481 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || || |||| ||||||||||| | || | ||||| || ||||| || |||||||| Sbjct 499116 TCTTTCTGGATGTTGTAGTCAGAGAGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAA 499057 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | ||| ||||| || || ||| || ||| ||||| |||||| ||| ||| | Sbjct 499056 ATCAAACGTTGCTGATCTGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTT 498997 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACC 199602 |||| ||||| | | || || || || ||||| || ||||| Sbjct 498996 TCGATAGTGTCACTGGGCTCCACCTCTAAGGTGATAGTTTTACC 498953 >seq1 Length=768689 Score = 96.9 bits (106), Expect = 8e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 199451 TTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGC 199510 |||||||||| ||| || | ||||| || || ||||| || ||||| || | ||||||| Sbjct 684039 TTGTAGTCAGACAATGTACGACCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGC 683980 Query 199511 TGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCT 199570 ||||||||| || || || || || ||||| ||| || ||| | |||||| Sbjct 683979 TGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCA 683920 Query 199571 GTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | | || || ||||| ||||| || |||||||| | || ||||| ||||| || Sbjct 683919 CTGGGCTCCACCTCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTG 683864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918352439405