Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq19 324 2e-83 seq37 123 3e-23 seq86 95.1 2e-14 seq1 89.7 7e-13 >seq19 Length=272159 Score = 324 bits (358), Expect = 2e-83 Identities = 969/1479 (66%), Gaps = 41/1479 (3%) Strand=Plus/Minus Query 6704 ATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCT 6763 ||||| || || || | |||||| | || | ||||| ||| ||| || || || | | Sbjct 233439 ATACCGTTAGCGTCGATATCGAAGGTGACTTCGATTTGAGGTACACCTCTAGGAGCAGGT 233380 Query 6764 GGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCA 6823 | |||||| || | | || | || |||| |||| ||| | | | | ||||||| Sbjct 233379 GCAATACCTGTAAGGTGGAACTTTCCTAGTAGGTTGTTGTCCTTTGTCATAGCACGTTCA 233320 Query 6824 CCTTCATAGACTTTAATTGTCACCGCA----GGTTGATTATCTTGTGCCGTTGAGAAGAT 6879 ||||| | |||| || ||| | ||||| || ||| || | |||||| Sbjct 233319 CCTTCGAACACTTGGATGAACACACCTTCCTGGTTGTTTTCGTTG----GTGGTGAAGAT 233264 Query 6880 TTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACC 6939 |||| ||||| | || || || || || ||| |||| |||||| | |||||| Sbjct 233263 TTGTGTCTTCTTGGTAGGGATGGTAGTGTTCCTCTTGATAAGAACGGTCATGACACCACC 233204 Query 6940 CATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGA 6999 ||||||||| || || || || |||| || || | || || || ||||||| Sbjct 233203 TGCAGTTTCGAGACCGAGTGAGAGTGGTGCAACATCGAGAAGCAAAAGCTCTTGAA---- 233148 Query 7000 TTCGTTCC---CT--TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACC 7054 || |||| || ||||| | | |||||| ||||| || | || ||||| || || Sbjct 233147 -TCTTTCCAGACTGGTCACCAGAAAGGATGGCTGCTTGTACGGCGGCACCGTAAGCAACG 233089 Query 7055 GCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATT 7114 || ||||||||||| || | | | |||| || ||||| || | ||| | | | Sbjct 233088 GCTTCATCGGGGTTGATTGACCTGCTGGGTTCCTTTCCGTTGAAGAACTCCTTGATGAGT 233029 Query 7115 TGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT 7174 || || || ||||| || || || || || || | || | ||| | | |||| Sbjct 233028 GACTGGATCTTGGGGATACGCGTTGAACCTCCTACAAGTACAACTTCGTGTATTTTCCTC 232969 Query 7175 TTATCGA-TCT--TTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAAC 7231 || || | || |||| ||| |||| |||||| || || | | | ||| Sbjct 232968 TTGTCCAATCCACTTGATTCT---AGTGCTTTTTCAACTGGAATGAGTGTGCTCCTGAAT 232912 Query 7232 AAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCG 7291 || ||||| ||| || || | |||||| | || | ||| | | | || | || Sbjct 232911 TTTTCACCACACATTTCTTCGAACCTGGCACGGCTGATAGTTGTGTTGTAGTCGATACCC 232852 Query 7292 TCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTC--GAAGATAACGTTCGCTTTG 7349 ||||| | || |||| |||||| || | || | | | ||| || || |||| Sbjct 232851 TCGTAAAGTGAGTCAAGTTCAATAGTGGCCTGAGTTGAGCTGGAGAGTACA--CGTTTTG 232794 Query 7350 CGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT-CTTTC 7408 | | ||||| || | | ||| |||||||| || ||| | || | || ||||| Sbjct 232793 CCCTTTCACAGTGTGTCCTAAGACGGCGAAGGGCCCGTTTGTTGCTGGCGAGATTCTTTC 232734 Query 7409 TTATGTTTACGTTTA--AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTT 7466 |||| | | | || || | ||||| | ||| ||||| |||| Sbjct 232733 CATTGTTGATCCTCATGAAGTCCCTTACGCAGTGTTCTACAAGTAGGTTGTCGAAGTCTT 232674 Query 7467 CACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGT 7526 |||| || | |||||| || ||||| || || || ||||| |||||||| | || || Sbjct 232673 CACCTCCTAGGTGTGTGTCTCCCGCTGTAGCCTTTACTTCGAAGATACCATCCTCGATAG 232614 Query 7527 TTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT 7586 | | | || ||||| || ||||| ||||| || || || |||||||||||| | || | Sbjct 232613 TAAGAATTGATACATCGAAGGTACCGCCACCAAGATCGAAGATGAGTACGTTCTTTTCTT 232554 Query 7587 CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC 7646 | | || || ||||||||||| || ||||| || || |||||||| || || |||| Sbjct 232553 CCGATCCCTTTTTGTCGAGACCGTAGGCAATAGCGGCGGCGGTTGGTTCGTTGATGATAC 232494 Query 7647 GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGT 7706 | | | || || || ||||| || | |||||||| || || |||| || || || | Sbjct 232493 GCATAACATTGAGTCCTGCAATGGTACCTGCATCTTTGGTAGCCTGTCTCTGTGAGTCAT 232434 Query 7707 TAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCG 7766 | ||||| || || || || | || || ||| | || | || || || ||| ||||| Sbjct 232433 TGAAGTATGCTGGTACAGTGATAACGGCATCCTTAACAGTTTTTCCTAGGTACAGTTCCG 232374 Query 7767 CGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC-AGCCGCAAACTGTTTC 7825 | || || ||||||||| | || ||||| || ||||| ||||| | | || || ||| Sbjct 232373 CAATTTCCTTCATTTTGATGAGTACCATTGACGAAATTTCTTCTGGGTGGAAGCT-CTTC 232315 Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885 ||| || | || ||||| || | ||||| | || |||| || |||||| Sbjct 232314 TTTTGTCCTTGGAAGGTTACTTCGATGGTAGGTTTGCCTCCAATACCGTTGACCACCTTA 232255 Query 7886 TACGACCAATCTTTCATATCGTCTTGGACC-TGTTGGTCCGAAAACTTTCTTCCGATAAG 7944 | | ||| | ||||||||| ||||| ||| |||| ||| |||| |||| || ||||| Sbjct 232254 AATGGCCAGTGTTTCATATCATCTTGTACCGTGTT-GTCGTCAAACCTTCTACCAATAAG 232196 Query 7945 ACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTC 8004 | ||| ||||| ||||| ||||||| |||||| | ||| ||||||||| || || || Sbjct 232195 TCTCTTGGCATCGAAAACGGTGTTTTCTGGGTTCCTTGCTTCTTGGTTCTTGGCGGCATC 232136 Query 8005 CCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCC 8064 || || |||||||| | || || || |||||||| || || || |||| || || Sbjct 232135 ACCAATGAGACGTTC---GGTGTCGGTGAAAGCGACGTAAGAGGGTGTGGTTCTGTTACC 232079 Query 8065 TTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGT 8124 ||||| || | || || || || || || | | || || || || || || || Sbjct 232078 CTGGTCATTAGGTATGATCTCGACATTGTTGTCCTTGTATACACCTACACATGAGTAGGT 232019 Query 8125 TGTTCCTAAATCAATACCGATTGCTTG---AGTCATTTT 8160 || || || || |||||||| ||| | || |||||| Sbjct 232018 GGTACCCAAGTCGATACCGATAGCTGGTGCAGACATTTT 231980 >seq37 Length=429747 Score = 123 bits (136), Expect = 3e-23 Identities = 461/711 (65%), Gaps = 15/711 (2%) Strand=Plus/Minus Query 105291 AATTTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC 105350 |||||| ||||| ||||| ||||| || || |||| | | ||||| || || | Sbjct 383086 AATTTCACAACACAGGTTTGACGATTTTATGGTTCCAAGATTCTGTTGGTTTGATTTAGC 383027 Query 105351 ATTACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT-TAATAA 105409 || || || |||||||| ||||| ||||| | || ||||| ||||| || ||||| Sbjct 383026 GTTGCAGGCATCTTTGTATAGCATGAATGGGTTGCCTGTTTCGATTTGGCTTTGTAATA- 382968 Query 105410 TTGCTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATT 105469 | || ||| | | ||||||| |||| | | | || | | ||| |||| Sbjct 382967 TGGCAAACCATAGAGTCTGGGCTGGTATGGTTTTACGTCCTAGCCCCGCTGCTTCATATT 382908 Query 105470 TCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTG-ATCA 105528 | |||||| | || || || | ||| | || || | ||||| | || | ||| Sbjct 382907 TTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACC-TCGGCATTCATCT 382849 Query 105529 GGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATC 105588 || || | | || ||| | | | | | ||||| | |||||||||| ||| || ||| Sbjct 382848 GGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATC 382789 Query 105589 CACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATT 105648 || | || | || | |||| | ||| || |||||| | || ||||| ||| | Sbjct 382788 CATAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGG 382729 Query 105649 TCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTA 105708 || | ||||| | ||||| |||||||||||||| || || | |||| ||||| || Sbjct 382728 TCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTG 382669 Query 105709 CG---ACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGA 105765 || | || |||||| ||||||||||| || | || | | || ||||| || Sbjct 382668 CGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGCAACATAGGT 382609 Query 105766 ATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCG 105825 | |||||| | | | | || ||||| || ||||| | | | |||| | | | | Sbjct 382608 ACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCCTGATTTTG 382549 Query 105826 TGAACGTG-TAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGT 105884 || | || || || ||||| ||||| || || ||||| || || | | | | || Sbjct 382548 TG-GCATGCCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAAGGT 382490 Query 105885 ATCGTAAATACCGTC--GATACT-ATCTTCCTTATTCGCAATCAGGAAACACGATGACAT 105941 ||| | || || | | | | ||||| | ||| | | | ||| || |||||| Sbjct 382489 ATCAAATATTCCAGCCAGGGAGTCATCTTTCATAT---CCAGTAAGAAGCAACTTGACAT 382433 Query 105942 TTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAA 105992 ||||||||| ||||| || | ||| || ||||| || |||||| |||| Sbjct 382432 TTGTGGTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAA 382382 >seq86 Length=883075 Score = 95.1 bits (104), Expect = 2e-14 Identities = 256/386 (66%), Gaps = 8/386 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || |||||||||||||| | ||| ||||| || || || | | || || || | ||| Sbjct 445810 TCAAAATCTTCACCACCAAGGTGGGTATCACCAGCTGTGCCGATAACCTCGAAAACACCA 445869 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || | |||||| ||| ||||| || ||||||||||| || || | | ||| | Sbjct 445870 GAGTCCAACATTAACACCGAGACATCGAAAGTACCACCACCAAGATCGTAGACGAGGATA 445929 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | ||| || | | | |||| |||||| || || || || || || ||||| Sbjct 445930 TTGGACTCG--GTGGTAGCAC-GGTCGATACCGTAGGCAATGGCAGCGGCGGTGGGTTCG 445986 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| | | | || ||||| || | | || || || || | ||| ||| Sbjct 445987 TTGATGATACGTACAACCTCAAGTCCAGCGATGGCACCAGCGTCCTTAGTAGATTGACGT 446046 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG-ACTTTCTTACCGAG 7755 || | ||| || || || || || || || | | || | ||| || | |||||||| Sbjct 446047 TGAGCATCATTGAAATATGCTGGTACAGTGATAATGGCCT-TGTGCACCTCTTTACCGAG 446105 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 ||| || || || | |||||| || |||| ||||| | |||||||||| || Sbjct 446106 ATAATTCTCAGCAATCTGTTTCATCTTCTTAAGGACCATAGCACTGATCTCTTCAGGAGC 446165 Query 7816 AAACTGTTTCGTTT---CACCGTTAA 7838 ||| ||| |||| |||| |||| Sbjct 446166 GTACTCTTTAGTTTGGGCACCTTTAA 446191 Score = 89.7 bits (98), Expect = 7e-13 Identities = 257/393 (65%), Gaps = 2/393 (1%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGAT-TT 6669 ||||| ||||| ||||| | ||||| ||| |||||| ||| || || | || Sbjct 444976 TCAATCTCTTCAGGAGATAAACGACCCTTGTCAGGGGTAATCACAATGTTA-CGCTTGTT 445034 Query 6670 ACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCT 6729 ||| | | || ||||||||| ||| |||||||||| || | || || || || | Sbjct 445035 ACCACTGCCTTTCTCTTCAGCAGACACACTCAAAATACCGTTGGTGTCCACGTCAAAAGT 445094 Query 6730 TACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACC 6789 ||| | ||| || || ||| | || || | || |||||||| ||||||||| |||| Sbjct 445095 TACCTCAATCTGAGGAACACCACGAGGGGCAGGAGGGATACCCGTCAAATCAAATTTACC 445154 Query 6790 AAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGC 6849 || | |||| ||| | | | | |||| | ||| | || || | || ||||| | Sbjct 445155 GAGATGAGTGTTGTCCTTAGTCATAGTACGCTGACCCTGGTACACCTGGATGGTCACGGT 445214 Query 6850 AGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATT 6909 | || || || | || ||||||||||| || | || || | | | || Sbjct 445215 GGACTGGTTGTCCGAGGAAGTAGAGAAGATTTGAGACTTGTGAGCAGGCAACAAAGAGTT 445274 Query 6910 TCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGT 6969 ||| ||||| | || ||||| |||||| | || |||| || | ||||| ||| Sbjct 445275 CCTCTCAATAATCACGGACATAACACCACCAACTGTCTCGATACCCAAAGACAAAGGACA 445334 Query 6970 CACGTCCAAGAGTAACAGGTCTTGAACAGATTC 7002 ||| || || | ||||| || ||| |||||| Sbjct 445335 CACATCTAACAATAACACATCGTGAGTAGATTC 445367 >seq1 Length=768689 Score = 89.7 bits (98), Expect = 7e-13 Identities = 227/336 (68%), Gaps = 12/336 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTG-TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATAC 7514 |||||||||||||||| ||||||| || | || ||| || || || || || | || Sbjct 618085 ATCGAAATCTTCACCA-CCAAGTGAAGTGTTTCCATTGGTAGCCTTTACCTCGAACACAC 618027 Query 7515 CTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 |||| || | || | |||| ||| || ||||| |||||||| || | | | | Sbjct 618026 CTCCAAGTATCTCCAATATGGAAATATCGAAGGTACCTCCACCCAGATCGTACACGGCAA 617967 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | || | | ||||| || |||||| |||| | ||| || || || |||| Sbjct 617966 TGGTC-TTTC-----CATCATTCTTTTCAAGACCGAACGCCAAAGCAGCTGCGGTAGGTT 617913 Query 7635 CATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | || || || | || ||| | || |||||||| | | ||||| || || ||||| Sbjct 617912 CGTTGATGATCCTCAATACA-TCAAGTCCAGCAATTTTACCGGCATCCTTGGTAGCTTGG 617854 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA-CTTTCTTACC 7752 ||||| || || || || || || || || || | || || | || | ||||||| || Sbjct 617853 CGTTGGGAGTCATTGAAATATGCTGGTACTGTAATAACAGCTTTGGTTACCTTTCTT-CC 617795 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||||| | ||| || | || |||| |||| ||| Sbjct 617794 GAGATGTGCTTCGGCAGTCTCCCTCATCTTGGAAAG 617759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131093080600