Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq37 150 2e-31 seq86 84.2 3e-11 >seq37 Length=429747 Score = 150 bits (166), Expect = 2e-31 Identities = 541/826 (65%), Gaps = 25/826 (3%) Strand=Plus/Minus Query 110230 TCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCA 110289 |||| ||||| | | ||||| | ||| |||||||| || ||||| | || || || Sbjct 383196 TCATATAGTTTCTTGAAATCGTATGTTCGTGTCTCCTTGTTCACATACATAGGCAGCGCT 383137 Query 110290 ATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTA 110349 ||||| || | |||||| || | || ||| ||||| | | |||||| | Sbjct 383136 ATAGATGCCAAATTGCAGACTGCCACTTCCTCTGGAGAAGTGTACTGAACAATTTCACAA 383077 Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409 |||| ||| || || ||| || | |||| || || ||||| | |||||| ||| Sbjct 383076 CACAGGTTTGACGATTTTATGGTTCCAAGATTCTGTTGGTTTGATTTAGCGTTGCAGGCA 383017 Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA-ATGGCCTTCCA 110468 || || || |||||| ||||| | || ||||| | || | ||| | ||||| ||| Sbjct 383016 TCTTTGTATAGCATGAATGGGTTGCCTGTTTCGATTTG-GCTTTGTAATATGGCAAACCA 382958 Query 110469 TACA-TCGGCGGCGGGGACAGTTG--CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTA 110525 || | || | ||| || | ||| ||| | || || | | || || || ||||| Sbjct 382957 TAGAGTCTG-GGCTGGTATGGTTTTACGTC--CTAGCCCCGCTGCTTCATATTTTGTGTA 382901 Query 110526 CAAGT-CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAG 110583 |||| |||| ||||| | || | |||||| | ||||| | || || || || || Sbjct 382900 -AAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACC-TCGGCATTCATCTGGGCAC 382843 Query 110584 AAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGAACAGGTCAGGAATCCAC 110640 | || | ||| | || | | ||||||| |||||||||||||| ||||| ||||| Sbjct 382842 ATAAGTGTCCAGT---CAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATCCAT 382786 Query 110641 ATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCC 110700 | || |||| | || | | || |||||| | || || || ||||| ||| Sbjct 382785 AATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGGTCC 382726 Query 110701 AAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG- 110759 || || ||||||||||| | |||||||||||| | || | || | || ||||| || Sbjct 382725 AAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTGCGT 382666 Query 110760 --ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATA 110817 | ||| | || | ||||| | ||| || |||||||| | | | |||||| | | Sbjct 382665 TTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGCAACATAGGTACA 382606 Query 110818 ATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTG 110876 || || | | || ||| |||||||| | ||| | | || | | || | || | ||| Sbjct 382605 ATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCAC-CACTTGCCCTGATTTTGTG 382547 Query 110877 GATATG-CATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTAC 110935 | ||| || ||| ||||| || || || || || || ||| || | ||| | ||| Sbjct 382546 G-CATGCCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAAGGTAT 382488 Query 110936 CATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAG 110995 || | || ||| | | || || | || | | | || |||||| ||||| || | Sbjct 382487 CAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTTGACATTTGTG 382428 Query 110996 GACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 | | || || || | ||||||||| || ||||||||| |||| Sbjct 382427 GTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAA 382382 >seq86 Length=883075 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 168439 AGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACA-GCGAGAGT 168497 |||||||| || ||||||| |||| ||| || || ||||||||||| | | ||| || Sbjct 115655 AGTGGAAACACACCATAATTGTCTCGACCAACAACTGAGAGACCAGCTAAACATGAG-GT 115597 Query 168498 TTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGCCGTACCAGC 168557 || || || || |||||||||| ||||| ||||| | | | || ||||| || Sbjct 115596 CTTGGCAGAGTCTCCCTCTGTCAATATGAGAGTACATTCACGGGCATGACGAGTACCTGC 115537 Query 168558 TTTGTTCGCATCGTCCAATTTGGGGATACCAGT 168590 ||||| ||||| || || || ||||| ||||| Sbjct 115536 CTTGTTAGCATCTTCTAACTTAGGGATCCCAGT 115504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974417127000