Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq37 212 7e-50 seq12 82.4 9e-11 >seq37 Length=429747 Score = 212 bits (234), Expect = 7e-50 Identities = 847/1308 (65%), Gaps = 44/1308 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 ||||| || ||||||| ||||| || | || || || |||| || |||| || || Sbjct 383670 TAGATATTGCTCGTGTAAGGTTCGAAAGACTCGTTGTTTCCCAGAATCTGTGACGTCGAT 383611 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || |||| || || ||| || | || | || ||||| | Sbjct 383610 GCCGTGGGCATCGGGGCCAAGAATAGTGAGTTGCGCAAGCCGTGTTTGGCCATGCGACGC 383551 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTC-ACCTT-----CCCACATATCAAAT 106108 |||||| | |||||||| | || ||| | || ||| | |||| | ||||| Sbjct 383550 TTGAGATCGTCCCAGTCCCAC---AGTTTGTTATCCACCGTAGCACCCCAGAGGTCAAAC 383494 Query 106109 TGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA 106168 || || || | || | || ||||| | | | ||||| |||| || || ||| Sbjct 383493 TGTAGTTTACCCTTCGAAGCAGGCGAACCTTGATAAGTCTCGTAGGGTCCATGTTTCTCA 383434 Query 106169 GCCAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227 |||||| | || | | ||||| || | | || |||||||| ||||||||| || Sbjct 383433 GCCAATGAGATAGA-CTCATCCAGACATCCATAGTAGATGGTTTCGAAGATACGACGGTT 383375 Query 106228 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287 | ||||||||||| || || || || | ||| | || || || || || || Sbjct 383374 TAATTCCTTGGCTTCTTCCGACTCGAAAGGGTACCTCATTAACATGAAAGTGTCAGCCAG 383315 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT--AGACTTTCGCGCAGTCTC- 106344 |||||| || || | |||||| || || || || || ||||||| || ||| Sbjct 383314 ACCTTGTACTCCAACACCAATTGGCCTATGGCGTTGGTTGGAGACTTTGGCC---TCTGG 383258 Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATT---TTTGGTAACAATCTTTGT 106401 ||| ||||| |||| | |||||||| | ||||| || | || | ||| || Sbjct 383257 AACCGGATAGTAATTCCGGTCAATGATCCTGTTTAAGTTGAATGTGATGACACG---TGC 383201 Query 106402 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAG 106461 | |||| ||||| | |||| | || || ||||| | || |||||| | || || Sbjct 383200 CACATCATATAGTTTCTTGAAATCGTATGTTCGTGTCTCCTTGTTCACATACATAGGCAG 383141 Query 106462 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 106521 || || |||||||||||||| || ||| || || | ||||||| | |||||| Sbjct 383140 CGCTATAGATGCCAAATTGCAGACTGCCACTTCCTCTGGAGAAGTGTACTGAACAATTTC 383081 Query 106522 TGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCA 106581 ||||| ||| || || || || || | ||||| |||||| || |||||| Sbjct 383080 ACAACACAGGTTTGACGATTTTATGGTTCCAAGATTCTGTTGGTTTGATTTAGCGTTGCA 383021 Query 106582 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCT 106640 ||||| ||||| |||||| | || | || || || | || | ||| | || || Sbjct 383020 GGCATCTTTGTATAGCATGAATGGGTTGCCTGTTTCGATTTG-GCTTTGTAATATGGCAA 382962 Query 106641 TCCACACA-TCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTACTTT 106696 ||| | | || | ||||||| |||| || | || | ||| | || || || ||| Sbjct 382961 ACCATAGAGTCTG-GGCTGGT---ATGGTTTTACGTCCTAGCCCCGCTGCTTCATATTTT 382906 Query 106697 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGG 106755 ||||| || || || || || |||||| | || | |||||| | || || ||||| Sbjct 382905 GTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCG-GCATTCATCTGG 382847 Query 106756 ACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 106815 || | ||| | ||| | | | ||||||| | ||||||||| || || || ||||| Sbjct 382846 GCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATCCA 382787 Query 106816 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875 | | | || | ||||||| || || ||||| | || || || |||| || Sbjct 382786 TAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGGTC 382727 Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 106935 | ||| ||||||||||| ||||||||||| || | || | || | || ||||| || Sbjct 382726 CAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTGCG 382667 Query 106936 ---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTT--AAATACGCGAAGCATTGGA 106990 | ||| |||||| |||||| | || || || || |||||||| | ||| || Sbjct 382666 TTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGC--AACATAGGT 382609 Query 106991 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 107050 | |||||| | || ||| ||||| || ||||| || | | || || | | Sbjct 382608 ACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCCTGATTTTG 382549 Query 107051 TGG-ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 107109 ||| ||| || || ||||| ||||| || || ||| || || | || | || Sbjct 382548 TGGCATG-CCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAAGGT 382490 Query 107110 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 107169 || | || || | ||||| || || | | | | ||||||||| ||||| || Sbjct 382489 ATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTTGACATTTG 382430 Query 107170 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 107217 ||||||||||| || | |||||| ||||| || || ||| |||| Sbjct 382429 TGGTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAA 382382 >seq12 Length=203243 Score = 82.4 bits (90), Expect = 9e-11 Identities = 246/375 (66%), Gaps = 10/375 (3%) Strand=Plus/Minus Query 9190 TACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCG 9249 ||||||||||||| |||||||| | | || ||||||||||||| | || || || Sbjct 177628 TACGATCAAAGCGCCCTGGACGTACCAATGCTGGATCAAGGATATCAGCCCGGTTAGTAC 177569 Query 9250 CGGCGATGACAACAATACCTGTTTCAT-TATCAAAACCATCCATCTCTGTCAAAAGTTGG 9308 |||| | |||| | ||| | | | | | | || ||||||||||| || | || Sbjct 177568 CGGCAAGCACAATTACACC-GCTACTTGTCTTGAACCCATCCATCTCCACTAATATCTGA 177510 Query 9309 TTAATAGTTTGTTCCCGTTCATCATTCGC------TGGCATACCACCAGCACTGCGTTGC 9362 |||| || | || || || ||||| || || | |||||| ||| | | Sbjct 177509 TTAAGCGTGTTCTCACGCTCGTCATTAGCACCTGCTGAAAAACCACCTTTCGCGCGCTTC 177450 Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422 || || || ||||||||||| ||||| || || || |||| || | | || | Sbjct 177449 TTGCCTACAGCATCAATCTCGTCAATAAACACTATTGCTGGTGCGTTCTTCCTTGCTTTC 177390 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482 || ||||| ||||| || | | | ||| ||||||||||||| || | |||| | || Sbjct 177389 TCGAAGAGGTCGCGGACACGTGACGGGCCTACACCAACAAACACTTCGATAAAG-TCGCT 177331 Query 9483 GCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9541 | | || | || || || ||||| | || || |||| ||| || | ||||| Sbjct 177330 TCCAGATATGGAATAAAATGGTACATTTGCCTCGCCGGCAACAGCTTTAGCCAATAGAGT 177271 Query 9542 CTTACCCGTACCTGG 9556 ||||| ||||| || Sbjct 177270 TTTACCTGTACCAGG 177256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979214426600