Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq207 116 8e-21 seq1 89.7 1e-12 >seq207 Length=758373 Score = 116 bits (128), Expect = 8e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| ||||| ||||| || | || || | |||||||| || || Sbjct 499657 GTGAAGGGTACTTTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGGCCATCTTCAAGTTG 499598 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||||||||| ||||| || ||||| ||||| || |||||||| || || || Sbjct 499597 CTTCCCCGCGAAGATAAGACGTTGCTGATCTGGGGGAATACCCTCTTTGTCCTGGATCTT 499538 Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080 | |||||| ||||| |||||||| Sbjct 499537 TGCCTTGACATTCTCGATGGTGTC 499514 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| ||| |||||| ||||| ||||| || | || || | || || || |||||| Sbjct 499392 TGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGACCGTCCTCAAGCTGC 499333 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || | || ||||||||||| ||||| || |||||||| || || ||| Sbjct 499332 TTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCTTTGTCCTGGATCTTT 499273 Query 195058 TGCTTGACGTTCTCAATGGTGTC 195080 ||||||||| || || ||||| Sbjct 499272 GCCTTGACGTTTTCGATAGTGTC 499250 >seq1 Length=768689 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| ||||| ||||||||||| || | | || | ||||| || || ||| Sbjct 684063 TGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGACAATGTACGACCATCCTCAAGTTGC 684004 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || | || || ||||| ||||| || || || |||||||| || || Sbjct 684003 TTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTG 683944 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| || || ||||||||||| ||| ||||| || | || | || || || Sbjct 683943 GCCTTAACATTTTCAATGGTGTC---ACTGGGCTCCACCTCCAAAGTGATGGTTTTACCC 683887 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || ||||| | ||||| Sbjct 683886 GTTAAGGTCTTCACGAAAATCTGCAT 683861 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 125523 CCTTCCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGTTTTGAGAGACTTCGAAA 125582 |||||||||||||||||| ||||| ||||| ||||| || ||||| | | || || | Sbjct 623525 CCTTCCAAAGAAACACGGTAGGGGTGGACAGTCTGCGTTACGTTTCGCACGTCTACGTAT 623584 Query 125583 AGAAAAGAGACACAACTATTTGAGGAAAGTCGCAGAGAATGC 125624 |||| |||||||||| | |||||||| ||||| ||||| Sbjct 623585 GGAAAGACGACACAACTACGTAAGGAAAGTAGCAGAAAATGC 623626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478543724905