Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq207 104 2e-17 seq1 100 2e-16 >seq207 Length=758373 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | | ||||| |||| || ||||||||||| ||||| ||||| || Sbjct 499152 CCTCCCCTCAAACGAAGCACCAAATGAAGGGTACTTTCTTTCTGGATGTTGTAGTCAGAG 499093 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || |||||||| ||||| || || | |||||||| ||| | || Sbjct 499092 AGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAAATCAAACGTTGCTGATCTGGGGGA 499033 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| ||||| ||||| |||||| | | || | |||| || ||| || Sbjct 499032 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGCTCCACC 498973 Query 34935 TCGACGGTTATGGTTTTTCC 34954 || | ||| || ||||| || Sbjct 498972 TCTAAGGTGATAGTTTTACC 498953 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | | |||||||||| || ||||||||||||||||| ||||| || Sbjct 499680 CCTCCCCTCAAGCGAAGTACCAAGTGAAGGGTACTTTCTTTCTGAATGTTGTAGTCAGAG 499621 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || || || || || || || || || |||||||| ||| | || Sbjct 499620 AGTGTACGGCCATCTTCAAGTTGCTTCCCCGCGAAGATAAGACGTTGCTGATCTGGGGGA 499561 Query 34875 ACCCCCTCCTTGTC 34888 | ||||| ||||| Sbjct 499560 ATACCCTCTTTGTC 499547 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | | ||||| |||| ||||| |||||||||||||| ||||| || Sbjct 499416 CCTCCCCTCAAACGAAGTACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGAG 499357 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || | || || ||||| ||||| || || || | || || |||||| | || Sbjct 499356 AGTGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGA 499297 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| ||||| ||||| |||||| | | || | |||| || || || Sbjct 499296 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTACC 499237 Query 34935 TCGACGGTTATGGTTTTTCC 34954 || | || |||||||| || Sbjct 499236 TCCAATGTGATGGTTTTACC 499217 >seq1 Length=768689 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | | |||||| |||| || |||||||||||||| || ||||| || Sbjct 684087 CCACCCCTCAGACGAAGAACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGAC 684028 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | || |||| || || || || || || || || | || |||||||| | || Sbjct 684027 AATGTACGACCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGG 683968 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| || || | | || | |||| || ||| || Sbjct 683967 ATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCCACC 683908 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || |||||||| ||||| | |||||||| || ||||||||| Sbjct 683907 TCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTGCATA 683860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632749358520