Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq37 170 1e-37 >seq37 Length=429747 Score = 170 bits (188), Expect = 1e-37 Identities = 328/477 (69%), Gaps = 5/477 (1%) Strand=Plus/Minus Query 25899 ATAAATG-CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957 |||| || ||| ||||| ||| ||||||| ||| ||| || | ||| || ||||| | | Sbjct 382842 ATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATCCATAAT 382783 Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017 ||||| || |||||||| || || |||||| ||||||||| || ||| || ||| Sbjct 382782 GCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGGTCCAAG 382723 Query 26018 AAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTT 26077 ||||| | ||||| | |||||||||||| || || || ||||| || || | ||| Sbjct 382722 AAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTGCGTTTC 382663 Query 26078 CCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT 26137 || |||||||||||||| ||||||||||| ||||||||| |||||| || || ||| Sbjct 382662 CCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGCAACATAGGTAC-AAT 382604 Query 26138 CCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGC 26196 | |||| | |||||||| | |||| | | || | | || || | ||| || Sbjct 382603 ACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCCTGATTTTGTG-GC 382545 Query 26197 ATG-AATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGA 26255 ||| | ||| || || ||||| ||||| || ||| || | || | ||||| | Sbjct 382544 ATGCCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAAGGTATCAA 382485 Query 26256 AAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAAT 26315 | ||||| | | ||| ||||||| | | ||| || ||| || | ||| | Sbjct 382484 ATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTTGACATTTGTGGTC 382425 Query 26316 GAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTCA 26372 | ||| ||||| || | ||| || || |||||||| ||||| || ||||| Sbjct 382424 TTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAAATATTTTTGACTCA 382368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039336956125