Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq37 237 2e-57 seq86 84.2 3e-11 >seq37 Length=429747 Score = 237 bits (262), Expect = 2e-57 Identities = 851/1308 (65%), Gaps = 42/1308 (3%) Strand=Plus/Plus Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGT 75364 |||| ||| || || ||||| |||||| | || ||||||||||| || ||||| ||| Sbjct 382382 TTCACTCATGCGACGCCAACACTCTTCTTCTCAGGGACACCAAGACCACAAATGTCAAGT 382441 Query 75365 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 75424 |||||| | | | | || || ||||| | || || | || || | || | Sbjct 382442 TGCTTCTTACTGGATATGAAAGATGACTCCCTGGCTGGAATATTTGATACCTTGACACAA 382501 Query 75425 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACAT-CCATGATGTGAGAGC 75483 || || ||| || || ||||| ||||| || || ||| ||| | | || || Sbjct 382502 TGCGCATTCATCAGCAAATGTGCTGGAGGTATAGGTTTGG-CATGCCACAAAATCAGGGC 382560 Query 75484 CAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 75543 | | || ||||| || ||||| ||| || | |||||| | || ||| | | Sbjct 382561 AAGTGGTGCTTACATTCGCGGTACAAACGGTAAAAGCAACGGTATTGTACCTATGTT--G 382618 Query 75544 CGTATTT--AACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCC 75598 ||||||| || || || || | |||||| |||||| || | ||||||||||| Sbjct 382619 CGTATTTTCAATGCTACTGCAAGATATGTAGATCAAGGTGGTGGGAAACGCAAGGGGTCG 382678 Query 75599 ATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTC 75658 | || | ||||||||||||||||| || ||||||||||| ||| | || |||| Sbjct 382679 TTTGCCATATACTTGGAACCATGGCACGCTGATATCATGGATTTCTTGGACCTACGTAAA 382738 Query 75659 AACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGAC 75718 || || || | ||||| || || ||||||| | || | | | ||||| || || Sbjct 382739 AATCACGGAGCTGAAGAAGCAAGGGCTAGAGATTTGTTCTATGCATTATGGATACCTGAT 382798 Query 75719 CTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGC 75777 || ||||||||| | ||||||| | | | ||| | ||| | || ||||| || || Sbjct 382799 CTGTTCATGAAGAGAGTTGAGGCAAACGCTGACTGGACACTTATGTGCCCAGATGAATGC 382858 Query 75778 ACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGA 75837 | |||||| | || | |||||| || || || || || |||||||| ||||||| Sbjct 382859 -CGAGGTCTATATGATGTTTGGGGTGACGAATTCGAGGCACTTTACACAAAATATGAAGC 382917 Query 75838 GGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGA-TGTTTGGAAGGCTATTCT-CAAA 75895 | ||| || | || |||||||| | || | | ||| || || | |||| Sbjct 382918 AGCGGGGCTAGGACGTAAAACCATACCAGCC-CAGACTCTATGGTTTGCCATATTACAAA 382976 Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 | || | || || || | |||| ||||| ||||| ||||| || ||| || Sbjct 382977 GC-CAAATCGAAACAGGCAACCCATTCATGCTATACAAAGATGCCTGCAACGCTAAATCA 383035 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 |||||| ||||| | ||||| || || ||||| || || |||||| | ||||| Sbjct 383036 AACCAACAGAATCTTGGAACCATAAAATCGTCAAACCTGTGTTGTGAAATTGTTCAGTAC 383095 Query 76016 ACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075 || | || || ||| || |||||||||||||| || || || || | |||||| Sbjct 383096 ACTTCTCCAGAGGAAGTGGCAGTCTGCAATTTGGCATCTATAGCGCTGCCTATGTATGTG 383155 Query 76076 AATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACC 76135 || | ||||| || || | |||| | ||||| |||| | || ||| | | Sbjct 383156 AACAAGGAGACACGAACATACGATTTCAAGAAACTATATGATGTGGCA---CGTGTCATC 383212 Query 76136 AAA---AATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAA 76191 | | || ||||| | |||||||| | |||| ||||| ||| ||| || ||| Sbjct 383213 ACATTCAACTTAAACAGGATCATTGACCGGAATTACTATCCGGTTCCAGA---GGCCAAA 383269 Query 76192 GTCT--AATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTT 76249 |||| || || || || || |||||| | || || |||||||| || || || Sbjct 383270 GTCTCCAACCAACGCCATAGGCCAATTGGTGTTGGAGTACAAGGTCTGGCTGACACTTTC 383329 Query 76250 ATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTT 76309 || || | ||| | || || || || ||||||||||| | || ||||||||| Sbjct 383330 ATGTTAATGAGGTACCCTTTCGAGTCGGAAGAAGCCAAGGAATTAAACCGTCGTATCTTC 383389 Query 76310 GAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCC 76369 |||||||| || | | || ||||| | | | ||||||||| || || || Sbjct 383390 GAAACCATCTACTATGGATGTCTGGATGAGTCTATCTCATTGGCTGAGAAACATGGACCC 383449 Query 76370 TATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGG-- 76427 || ||||| | | | ||||| || || || | || || |||||||| | |||| Sbjct 383450 TACGAGACTTATCAAGGTTCGCCTGCTTCGAAGGGTAAACTACAGTTTGACCTCTGGGGT 383509 Query 76428 ---AAGGT-GAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCAT---CAAG 76480 | ||| || | ||| || | |||||||| | ||||||| ||||| ||| Sbjct 383510 GCTACGGTGGATAACAAACT---GTGGGACTGGGACGATCTCAAGCGTCGCATGGCCAA- 383565 Query 76481 GAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAA 76540 | | || | | || ||| || || |||| || ||||| || || || || |||| Sbjct 383566 -ACACGGCT-TGCGCAACTCACTATTCTTGGCCCCGATGCCCACGGCATCGACGTCACAG 383623 Query 76541 ATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || |||| || || || | || ||||| ||||| | || |||||| Sbjct 383624 ATTCTGGGAAACAACGAGTCTTTCGAACCTTACACGAGCAATATCTAC 383671 >seq86 Length=883075 Score = 84.2 bits (92), Expect = 3e-11 Identities = 113/155 (73%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 13548 TTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGT 13607 |||| || || || ||||| || || || |||||||| ||||| || | | | | Sbjct 115502 TTACTGGGATCCCTAAGTTAGAAGATGCTAACAAGGCAGGTACTCGTCATGCCCGTGAAT 115561 Query 13608 GTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTT-GCGGGTCTCTCT 13666 |||||||||| | |||||||| || || || || | |||| | || || |||||||| Sbjct 115562 GTACTCTCATATTGACAGAGGGAGACTCTGCCAAGA-CCTCATGTTTAGCTGGTCTCTCA 115620 Query 13667 GTCGTTGGTCGTGATCACTACGGTGTGTTCCCACT 13701 || |||||||| || | || |||||||| ||||| Sbjct 115621 GTTGTTGGTCGAGACAATTATGGTGTGTTTCCACT 115655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567996719200