Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq37 100 8e-16 seq180 89.7 2e-12 >seq37 Length=429747 Score = 100 bits (110), Expect = 8e-16 Identities = 507/797 (64%), Gaps = 21/797 (3%) Strand=Plus/Minus Query 155562 TCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCT-T 155620 |||| || ||| ||||| || | ||||| |||| ||| || || || |||| | Sbjct 383163 TCCTTGTTCACATACATAGGCAGCGCTATAGATGCCAAATTGCAGACTGCCACTTCCTCT 383104 Query 155621 GTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATT 155680 | | | |||| | ||||| ||||| |||||||| || || ||||| || | ||| Sbjct 383103 GGAGAAG-TGTACTGAACAATTTCACAACACAGGTTTGACGATTTTATGGTTCCAAGATT 383045 Query 155681 CTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTC 155740 || ||||| |||||| ||| || ||||| |||||||| ||| ||||| | ||||| || Sbjct 383044 CTGTTGGTTTGATTTAGCGTTGCAGGCATCTTTGTATAGCATGAATGGGTTGCCTGTTTC 382985 Query 155741 CATCTGTGCGTCCAGAATCTTTAGCCAGAG-GTCACGG---GCATTAATTTGCTTGTTGT 155796 || || | | || | ||| || ||| || | || ||| | || | Sbjct 382984 GATTTGGCTTTGTAATATGGCAAACCATAGAGTCTGGGCTGGTATGGTTTTAC--GTCCT 382927 Query 155797 ATCTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCAC 155856 | | || | | |||||||| | || || | | | || ||||| || |||| Sbjct 382926 AGC--CCCGCTGCTTCATATTTTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCAT 382869 Query 155857 TCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCT 155916 || || |||| | ||| ||||| | || | ||| || | || | || Sbjct 382868 ATAGACCTCGGCATTCATCTGGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCT 382809 Query 155917 CCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCAT 155976 ||| || | |||| ||| | |||||||| | || || ||| ||| || ||| Sbjct 382808 TCATGAACAGATCAGGTATCCATAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAG 382749 Query 155977 CGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGAT 156036 | |||||||| || ||||| || ||||| ||| ||||||| || ||| |||| | Sbjct 382748 CTCCGTGATTTTTACGTAGGTCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGT 382689 Query 156037 ACATAGCAAAACTACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTAT 156093 | || ||||| || || | || ||||| ||||||||||| | ||||| || Sbjct 382688 ATATGGCAAACGACCCCTTGCGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCAT 382629 Query 156094 TGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCG 156153 |||| | || | |||||| | |||||| ||| | || || || |||||||| | | Sbjct 382628 TGAAAATACGCAACATAGGTACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAG 382569 Query 156154 AACCAGATGAGCGAACATTATGAATATG-TAGTCCAATACCACCTGACCATTTAGAAATT 156212 |||| || | | || || ||| | || ||||| || | ||||| || Sbjct 382568 CACCACTTGCCCTGATTTTGTG-GCATGCCAAACCTATACCTCCAGCACATTTGCTGATG 382510 Query 156213 TGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGT 156272 ||||||| | | |||| || || || | | || ||||||| ||| ||| Sbjct 382509 AATGCGCATTGTGTCAAGGTATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGT 382450 Query 156273 AGATAGCACGAACTT---AATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTT 156329 | || | ||||| | ||| |||| |||||| || | | ||| ||||| || || Sbjct 382449 A---AGAAGCAACTTGACATTTGTGGTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTC 382393 Query 156330 GCATGAATAAAATACTT 156346 |||||| | ||||| || Sbjct 382392 GCATGAGTGAAATATTT 382376 >seq180 Length=439454 Score = 89.7 bits (98), Expect = 2e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| || ||||||||||| ||||||||||| ||||| | ||||| || || | Sbjct 307752 GCTCCGTGCGATATCATACAATCGCGCTCCATTTCTCCGAACCTGAGACCCCCGTCTCTG 307693 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | |||||| |||| ||||| | ||||| || | || || | | | | ||| Sbjct 307692 GACCTACCTTCGGTGGGCTGTCTGGTGAGCATAGTTACCGGTCCTCTAGCTCTGGCGTGT 307633 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCT 251663 ||||| | |||||| || || || |||||||| ||| |||||| ||||| || || Sbjct 307632 ATTTTATCTTCTACCATGTGTTTAAGTCGCTGGTAATATGTGGGACCCATGAAAATCCT 307574 Score = 86.0 bits (94), Expect = 2e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 289111 GCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACA 289170 || || | |||||| ||||||| ||||||| ||| | || |||| || |||| ||| Sbjct 104831 GCACCTACACCAACGAACATTTCCTCAAATTCCGAACCTGAAGCTTGTATAAATGGGACA 104772 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 ||||| || || || || || |||| || ||||| || || || ||||||||| | Sbjct 104771 CCCGCTTCCCCCGCAACCGCTCTAGCCAACAGGGTCTTGCCCGTCCCTGGTGGTCCCGCC 104712 Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 | ||| ||||||||||| | | ||| ||| Sbjct 104711 AGTAGCACTCCCTTTGGCAATCGTGCTCCA 104682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813545602455