Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq207 109 5e-19 seq37 98.7 9e-16 seq1 91.5 1e-13 >seq207 Length=758373 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 ||||||||||| || | || || || ||| ||||| | |||| || || |||| Sbjct 498953 GGTAAAACTATCACCTTAGAGGTGGAGCCCAGTGACACTATCGAAAACGTCAAGGCAAAG 499012 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||| |||||||| || || || || ||||| ||||||||||| || ||||| |||||| Sbjct 499013 ATCCAGGACAAAGAGGGTATTCCCCCAGATCAGCAACGTTTGATTTTCGCCGGTAAACAG 499072 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 || |||||| | | | || || || ||||| || || ||| || || || ||| Sbjct 499073 CTCGAGGATGGCCGTACACTCTCTGACTACAACATCCAGAAAGAAAGTACCCTTCATTTG 499132 Query 24911 GTGTTGCGATTGCGCGGAGG 24930 ||| | || ||| | ||||| Sbjct 499133 GTGCTTCGTTTGAGGGGAGG 499152 >seq37 Length=429747 Score = 98.7 bits (108), Expect = 9e-16 Identities = 226/336 (67%), Gaps = 11/336 (3%) Strand=Plus/Minus Query 139303 TCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACAC 139362 || || ||| ||| ||| | |||||| ||||| | | ||| | ||| | || || Sbjct 382914 TCATATTTTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCGGCAT 382855 Query 139363 TTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCC 139422 | || || ||||| || | ||| | |||| |||| || | | ||||||||||||| Sbjct 382854 TCATCTGGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCA 382795 Query 139423 GGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACC---CATGTTA 139479 || ||||| || || | | |||||| | ||| | ||||| | || | ||| Sbjct 382794 GGTATCCATAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTA 382735 Query 139480 CGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 ||| | || | |||||| | | ||||||||||||||||||| || ||||| | Sbjct 382734 CGT---AGGTCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAAC 382678 Query 139540 GCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 | || || ||||| ||||||||||| || | || | ||| | |||||| | ||| Sbjct 382677 GACCCCTTGCGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGC 382618 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTT-CCGTTGGT 139631 ||||| || | | |||| | ||| || ||||| || Sbjct 382617 AACATAGGTACAATACCG-TTGCTTTTACCGTTTGT 382583 >seq1 Length=768689 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| || | || || |||| |||||||| || || | || || || || Sbjct 683858 ACTATGCAGATTTTCGTGAAGACCTTAACGGGTAAAACCATCACTTTGGAGGTGGAGCCC 683917 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | |||| || || |||||||||||||| || || || ||||| || Sbjct 683918 AGTGACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCGGAC 683977 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGAT 24877 || || |||||||| || || || || || || |||||| ||| ||| |||| || Sbjct 683978 CAGCAGCGTTTGATTTTCGCTGGCAAGCAACTTGAGGATGGTCG---TACATTGTCTGAC 684034 Query 24878 TATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || ||| || || || ||||| Sbjct 684035 TACAATATTCAGAAAGAAAGTACTCTTCATTTGGT 684069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896390900200