Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq160 131 3e-24 seq180 114 2e-19 seq207 91.5 2e-12 seq37 89.7 8e-12 >seq160 Length=968721 Score = 131 bits (144), Expect = 3e-24 Identities = 178/243 (73%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || || ||||||||| ||| || || || | | Sbjct 455017 TGTACTTGGTGACGGCCTTGGTCCCTTCAGACACGGCGTGCTTGGAGAGCTCACCAGGTA 455076 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || |||||||| || || || || | || || ||| | |||||| || | Sbjct 455077 ATAGGAGACGTACGGCGGTTTGAATTTCACGTGAGCTGAGTGTGCTCTTCTTGTT-GTAC 455135 Query 1485590 GCGCCAGG-CGGCCGGCCTCG-GTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | | | | |||||| | ||| |||||||||| |||||||||| || ||||| Sbjct 455136 CTGATAAGTCTGGTAGCCTCGAGAGCC-ATGCGGTCGAAAATGTCGTTGATGAATGAGTT 455194 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| ||||| || || | || ||||||||||||||||| | ||| || Sbjct 455195 CATGATAGACATGGATTTCTTCGACACACCAGTTTCGGGGTGCACCTGCTTCAACACTTT 455254 Query 1485708 GTA 1485710 ||| Sbjct 455255 GTA 455257 >seq180 Length=439454 Score = 114 bits (126), Expect = 2e-19 Identities = 171/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || |||||||||||||| || ||||||||| ||| || || || | | Sbjct 365199 TGAACTTGGTCACTGCCTTGGTACCCTCAGACACGGCGTGCTTGGAAAGCTCACCAGGGA 365258 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || ||||| |||| ||| |||| || | || | |||||| || | Sbjct 365259 GAACCAACCTGACAGCGGTTTGGACCTCACGGGAGCTAAGAGTTTCCTTCTTGTT-GTAC 365317 Query 1485590 GCGCCAGGCG-GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || | || || ||||||| || | || ||||| ||||| ||| || |||||| Sbjct 365318 TTGCAAAGCTTGCTGGCCTCGCTGGCAATCTTGTCGAAGGTGTCGGTGATGAAAGAGTTC 365377 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||||| |||||| || ||| ||| || ||| |||||||| ||||| ||||||||| Sbjct 365378 ATGATCATCATCGACTTCTTGCTGATACCGGTGTCCGGGTGCACTTGCTTAAGCACCTTG 365437 >seq207 Length=758373 Score = 91.5 bits (100), Expect = 2e-12 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 794356 ATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATG 794415 |||| |||||||| ||| ||||| ||||| || || || ||||| ||||| || || Sbjct 378089 ATCAGCTCGTTGCTGAAGGTAAGGCCTGGCATAAGACCACGTTTCTTCAGCCAGAAAATA 378030 Query 794416 GCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 ||||||||||| ||||| ||||| |||||||| || || ||| || Sbjct 378029 GCACAGAAACTTCCCGAAAAAAATATGCCCTCAACAGCTGCATAG 377985 >seq37 Length=429747 Score = 89.7 bits (98), Expect = 8e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 2069595 CAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCT 2069654 || ||| |||| || ||| ||| ||||| ||||| || || |||||| ||||| Sbjct 383719 CAAGTGAGGGTTCACAACGAAAAACTCGCCACTAAGCACACGCCGATAGTAGATATTGCT 383660 Query 2069655 CGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCAT 2069714 |||| ||| | | |||| |||| ||||| ||||| ||||||| ||||||||||| Sbjct 383659 CGTGTAAGGTTCGAAAGACTCGTTGTTTCCCAGAATCTGTGACGTCGATGCCGTGGGCAT 383600 Query 2069715 GAGCGCCACGAGCAGCGAGTTGCGCAGGCCGT 2069746 | |||| || || |||||||||| ||||| Sbjct 383599 CGGGGCCAAGAATAGTGAGTTGCGCAAGCCGT 383568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916223529469385