Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq207 107 1e-18 seq1 98.7 6e-16 >seq207 Length=758373 Score = 107 bits (118), Expect = 1e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | || |||| ||||| ||| || || ||||||||||| ||||| || Sbjct 499680 CCTCCCCTCAAGCGAAGTACCAAGTGAAGGGTACTTTCTTTCTGAATGTTGTAGTCAGAG 499621 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || |||||||| || |||||||| || |||||||| ||| | || Sbjct 499620 AGTGTACGGCCATCTTCAAGTTGCTTCCCCGCGAAGATAAGACGTTGCTGATCTGGGGGA 499561 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGAC 34902 | ||||| ||||| | || ||| ||||| Sbjct 499560 ATACCCTCTTTGTCCTGGATCTTTGCCTTGAC 499529 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | || |||| |||| ||||||||| ||||||||||| ||||| || Sbjct 499416 CCTCCCCTCAAACGAAGTACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGAG 499357 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || | || || || |||||||| ||||| |||| || || |||||| | || Sbjct 499356 AGTGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGA 499297 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| ||||| | || ||| |||||| | | || | ||| ||| || || Sbjct 499296 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTACC 499237 Query 34931 TCAACGGTTATGGTCTTTCC 34950 || | || ||||| || || Sbjct 499236 TCCAATGTGATGGTTTTACC 499217 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | || |||| |||| ||| || || ||||| ||||| ||||| || Sbjct 499152 CCTCCCCTCAAACGAAGCACCAAATGAAGGGTACTTTCTTTCTGGATGTTGTAGTCAGAG 499093 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || || || || |||||||| |||| |||||||| ||| | || Sbjct 499092 AGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAAATCAAACGTTGCTGATCTGGGGGA 499033 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| ||||| | || ||| |||||| | | || | ||| ||| ||| || Sbjct 499032 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGCTCCACC 498973 Query 34931 TCAACGGTTATGGTCTTTCC 34950 || | ||| || || || || Sbjct 498972 TCTAAGGTGATAGTTTTACC 498953 >seq1 Length=768689 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | || |||| |||| || || || |||||||| || ||||| || Sbjct 684087 CCACCCCTCAGACGAAGAACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGAC 684028 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| || |||||||| || ||||| |||| || |||||||| | || Sbjct 684027 AATGTACGACCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGG 683968 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || || | | || | ||| ||| ||| || Sbjct 683967 ATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCCACC 683908 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || ||||| || ||||| | |||||| || || |||||||| Sbjct 683907 TCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTGCAT 683861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691946583085