Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq37 96.9 3e-15 >seq1 Length=768689 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 |||||||| |||||||| || || || ||| | ||||| || |||||||| ||| | Sbjct 684051 TCTTTCTGAATATTGTAGTCAGACAATGTACGACCA-TCCTCAAGTTGCTTGCCAGCGAA 683993 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| | ||||||||||| |||||||| || |||||||| |||||| ||| | | Sbjct 683992 AATCAAACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTGGCCTTAACATT 683933 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| ||||| |||||||||| || | |||| |||||| || || | || || || Sbjct 683932 TTCAATGGTGTCACTGGGCTCCACCTCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCAC 683873 Query 133649 GAAAATCTGCAT 133660 |||||||||||| Sbjct 683872 GAAAATCTGCAT 683861 >seq37 Length=429747 Score = 96.9 bits (106), Expect = 3e-15 Identities = 256/387 (66%), Gaps = 12/387 (3%) Strand=Plus/Minus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTC 148120 ||||||||||||| | || |||||||| ||||| || || | |||| || ||||| Sbjct 383908 CTGGTCAATGAACACTCCTCGGTCAGCAGCCATGTCGATAATGGTCTTTTGTTTGATCTC 383849 Query 148121 CCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGA 148180 ||| |||||||||| || |||||| || | || || || || ||| | | | || Sbjct 383848 CCATACCGTCTTGTAAAGATCCTTGATGTGCTGAGGGATACCCTCAATGTGTCGTAAGGA 383789 Query 148181 GCCGCGGTGCGCAAAAATCTGATTGCGCATT---TCGTCCGTGTATAGGTTGAGCTCGAT 148237 || || |||| || | | ||| || ||| | || || || | Sbjct 383788 TCCATTGTAAGCAATAAGTTTTTCCTTCATGCTCTCATCCCAG---AGTCCCAGGTCCAC 383732 Query 148238 CAGGTCATCGATCAGATACTGA---TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCG 148294 ||||| || ||| | ||| ||||| || ||||||||| ||||| ||||| Sbjct 383731 AAGGTCG-CG--CAGCAAGTGAGGGTTCACAACGAAAAACTCGCCACTAAGCACACGCCG 383675 Query 148295 CAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGT 148354 || | |||||||| | ||||| || ||||||||||| |||| |||||| | || Sbjct 383674 ATAGTAGATATTGCTCGTGTAAGGTTCGAAAGACTCGTTGTTTCCCAGAATCTGTGACGT 383615 Query 148355 CGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTT 148414 || |||||||||||| || | | || ||||||||||| ||| | || || Sbjct 383614 CGATGCCGTGGGCATCGGGGCCAAGAATAGTGAGTTGCGCAAGCCGTGTTTGGCCATGCG 383555 Query 148415 GCGCTTCAGAGCCGCCCAGTCCCAGAG 148441 ||||| ||| | |||||||||| || Sbjct 383554 ACGCTTGAGATCGTCCCAGTCCCACAG 383528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419500806600