Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 127 1e-24 seq207 122 6e-23 >seq1 Length=768689 Score = 127 bits (140), Expect = 1e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| ||| | |||||||| ||||| || ||||| || || ||||| || || Sbjct 684088 ACCACCCCTCAGACGAAGAACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGA 684029 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || || | ||| || || || ||||||||||||||||| || | || Sbjct 684028 CAATGTACGACCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGG 683969 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || || | | ||||| || | |||||| || | |||| Sbjct 683968 GATACCCTCCTTGTCTTGGATCTT-GGCCTTAACATTTTCAATGGTGTCACTGGGCTCCA 683910 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | || | ||||| |||||||| ||||| || || || || ||||||||||| Sbjct 683909 CCTCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTGCATAGT 683858 >seq207 Length=758373 Score = 122 bits (134), Expect = 6e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||||||| | ||||||||| || || || ||||| || |||||||| || || Sbjct 499153 ACCTCCCCTCAAACGAAGCACCAAATGAAGGGTACTTTCTTTCTGGATGTTGTAGTCAGA 499094 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||| || | || || | ||||| ||||| ||||||||||| ||||||||| | || Sbjct 499093 GAGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAAATCAAACGTTGCTGATCTGGGGG 499034 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| || || || | || | || | ||||| || | |||| Sbjct 499033 AATACCCTCTTTGTCCTGGATCTT-TGCCTTGACGTTTTCGATAGTGTCACTGGGCTCCA 498975 Query 33701 CGTCAACCGTGATCGTTTTACCTG 33724 | || | ||||| |||||||||| Sbjct 498974 CCTCTAAGGTGATAGTTTTACCTG 498951 Score = 120 bits (132), Expect = 2e-22 Identities = 150/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||||||| | |||||||| || ||||||||||| || |||||||| || || Sbjct 499417 ACCTCCCCTCAAACGAAGTACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGA 499358 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||| || |||| || | || ||||| || |||||||||||||| || ||| | || Sbjct 499357 GAGTGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGG 499298 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| || || || | || | || | ||||| || | ||| | Sbjct 499297 AATACCCTCTTTGTCCTGGATCTT-TGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTA 499239 Query 33701 CGTCAACCGTGATCGTTTTACCT 33723 | || | ||||| ||||||||| Sbjct 499238 CCTCCAATGTGATGGTTTTACCT 499216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703138692800