Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq180 98.7 9e-16 seq169 93.3 4e-14 >seq180 Length=439454 Score = 98.7 bits (108), Expect = 9e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 39777 GGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAAT 39836 |||||| ||||||||||||||||| | |||| ||||||||||||| ||||| |||| || Sbjct 187891 GGCGGGCATGGTCTAGTGGTTATGACATCTGCCTTACACGCAGAAGATCCCGAGTTCGAT 187950 Query 39837 CCCCGGTGCCCGTATTT 39853 || |||||||||||||| Sbjct 187951 CCTCGGTGCCCGTATTT 187967 >seq169 Length=508193 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| ||||| |||| ||| Sbjct 20639 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTTCGATC 20698 Query 39838 CCCGGTGCCCGTATTT 39853 | |||||||||||||| Sbjct 20699 CTCGGTGCCCGTATTT 20714 Score = 82.4 bits (90), Expect = 7e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 39777 GGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAAT 39836 |||||| ||||||||||| |||| || ||| || |||||||| || ||||| |||| || Sbjct 20407 GGCGGGCGTGGTCTAGTGGCTATGACGCCTGCTTCACACGCAGGAGATCCCGAGTTCGAT 20466 Query 39837 CCCCGGTGCCCGTATTTC 39854 || ||| ||||||||||| Sbjct 20467 CCTCGGCGCCCGTATTTC 20484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466123547289600