Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq160 98.7 1e-14 seq37 96.9 5e-14 >seq160 Length=968721 Score = 98.7 bits (108), Expect = 1e-14 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| ||| | ||||||||||||||| ||| | || | || || || ||| Sbjct 455260 ATCTACAAAGTGTTGAAGCAGGTGCACCCCGAAACTGGTGTG------TCGAAGAAATCC 455207 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCAC-CGAGGCCGG 725029 ||||| ||||||||||| || |||||||||| |||||||||| ||| | |||||| Sbjct 455206 ATGTCTATCATGAACTCATTCATCAACGACATTTTCGACCGCAT-GGCTCTCGAGGCTAC 455148 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 | || | | ||||||| | ||| || || | || || || || |||||||| Sbjct 455147 CAGACTTATCAGGTACAACAAGAAGAGCACACTCAGCTCACGTGAAATTCAAACCGCCGT 455088 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | | | || || || ||| ||||||||| || || || |||| Sbjct 455087 ACGTCTCCTATTACCTGGTGAGCTCTCCAAGCACGCCGTGTCTGAAGGGACCA 455035 >seq37 Length=429747 Score = 96.9 bits (106), Expect = 5e-14 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAG-CATGGCCTGCGCAACTCGTTGCT 262937 ||||||||||||| || | |||||| | | || || ||| |||||||||| | | Sbjct 383531 TGGGACTGGGACGATCT-CAAGCGTCGCATGGCCAAACACGGCTTGCGCAACTCACTATT 383589 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 | |||| | ||||||||||| ||||||| ||||| ||||| |||| |||| | ||||| Sbjct 383590 CTTGGCCCCGATGCCCACGGCATCGACGTCACAGATTCTGGGAAACAACGAGTCTTTCGA 383649 Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057 ||||||||| |||||| || || ||||| ||||| ||| ||| || || Sbjct 383650 ACCTTACACGAGCAATATCTACTATCGGCGTGTGCTTAGTGGCGAGTTTTTCGTTGTGAA 383709 Query 263058 CCGCCACCTG 263067 || ||| || Sbjct 383710 CCCTCACTTG 383719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177790462854830