Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq207 107 2e-18 >seq1 Length=768689 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | ||||| || || ||||| ||||| || | ||| || || | || || Sbjct 684069 ACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGACAATGTACGACCATCCTCA 684010 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || ||||| || || || ||||| ||||||||||||| ||| | | ||||||||| | Sbjct 684009 AGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGG 683950 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | || | | ||||| || | |||||||||| ||||| |||||| Sbjct 683949 ATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCCACCTCCAAAGTGATGGTTTTA 683890 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| || || ||||| || |||||||| Sbjct 683889 CCCGTTAAGGTCTTCACGAAAATCTGCAT 683861 >seq207 Length=758373 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || ||||| || ||||||||||| || | | || || |||| || Sbjct 499398 ACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGACCGTCCTCA 499339 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || ||||| ||||| ||||| | |||| | ||| |||||| | Sbjct 499338 AGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCTTTGTCCTGG 499279 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||||| ||| | || | | ||||| || | ||| ||||||| ||||| |||||| Sbjct 499278 ATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTTA 499219 Query 35708 CC 35709 || Sbjct 499218 CC 499217 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||||| || || ||||||||||| || | | || || | || || Sbjct 499662 ACCAAGTGAAGGGTACTTTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGGCCATCTTCA 499603 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || ||||| ||||| || || | || ||||| || | |||| | ||| |||||| | Sbjct 499602 AGTTGCTTCCCCGCGAAGATAAGACGTTGCTGATCTGGGGGAATACCCTCTTTGTCCTGG 499543 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||||| ||| | | | | | ||||| || | ||| ||||||| ||||| |||||| Sbjct 499542 ATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTTA 499483 Query 35708 CC 35709 || Sbjct 499482 CC 499481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792388492200