Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq37 149 9e-31 >seq37 Length=429747 Score = 149 bits (164), Expect = 9e-31 Identities = 477/724 (66%), Gaps = 12/724 (2%) Strand=Plus/Minus Query 69495 TTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACA 69554 |||||||| ||| || || |||||||| || ||||||||||||| | || | || Sbjct 382915 TTCATATTTTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCGGCA 382856 Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614 ||||| ||| ||||| | || ||| || | | ||| ||||| ||||| || ||||| Sbjct 382855 TTCATCTGGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATC 382796 Query 69615 GGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttt 69673 || ||||| | || ||| || | |||||| | || ||||||| ||| ||||| Sbjct 382795 AGGTATCCATAATGC-ATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTT 382737 Query 69674 ttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC-CATG 69732 | || || | || ||||| ||||||| ||||||||||| | ||||| || | | Sbjct 382736 TACGTAGGTCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACG 382677 Query 69733 ACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTC 69792 || ||| ||||| || || ||||||| ||||| ||||| ||| | | | | Sbjct 382676 AC-CCCTTGCGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGC 382618 Query 69793 AGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCG 69852 | ||| || | |||||| || |||||| ||||| || ||| ||| || ||||| Sbjct 382617 AACATAGGTACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCC 382558 Query 69853 CGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT 69912 | || || | | |||||| ||||| || ||| ||| | || || || Sbjct 382557 CTGATTTTGTGGCATGCCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGT 382498 Query 69913 TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 |||| || ||| |||| || | | | |||||| |||| | || | || || || Sbjct 382497 GTCAAGGTATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTT 382438 Query 69973 GACATTTGATGATGTATAGT-TCCCGCATTA-AATAATGTAGGAGATGCGTGAGTGAACC 70030 |||||||| || | | | || |||| | | || | ||| || | || |||||||| Sbjct 382437 GACATTTG-TGGTCT-TGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAAAT 382380 Query 70031 ATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATT 70089 |||||| | | || | || || | || | | ||| || || |||| ||| || Sbjct 382379 ATTTTTGACTCATGAGGTGATAAGTCTGTATTGTTCGTTCAATGTCACCAC-AATGTATC 382321 Query 70090 CCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTC 70149 ||| | || ||||| ||||| || || |||| ||| ||||| || || Sbjct 382320 CCTGCTGACACCCGCATTAACATGTGTTGTGGTCTTTCAGAAACTTTATCGTTAATGCGT 382261 Query 70150 AACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTCTCTTTC 70208 | |||||||| | |||| ||||| | |||||||| | ||| || ||| |||||| Sbjct 382260 AGAAGGTATGACCTCTCCAATGTTTTCAGACCAAAATAATCGTACTGGAAA-TCTCTTGT 382202 Query 70209 GTAA 70212 |||| Sbjct 382201 GTAA 382198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906953932600