Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq180 87.8 1e-12 >seq180 Length=439454 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 |||||||| ||||| ||||||| |||| ||||||||||| | ||||| ||||||| Sbjct 81479 ATGGCATTACCACCATGTCATTGTTTATTCCAGTTTTACGTCCGTGATGGTAAACTGTCT 81538 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 || || | || | || |||| | || | || || |||||||| || || | Sbjct 81539 TGCATGATGCACCAGCGTTCTTGTGATTTAGGTTTGGGTGTGCCGTTTAATATCGCTTCT 81598 Query 41169 TATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTT 41228 ||| | | | ||| |||||||||||| ||| ||||| | ||||| |||||| Sbjct 81599 TATTCGATATTAACGGCTATGATTGCACAAGTTTGTGGCTTAAAGCTGGGTGAGTTTGTT 81658 Query 41229 CACACGTTAGGAGATGGACATATTTA 41254 |||| || | |||| |||||| || Sbjct 81659 CACAATTTGGCTGATGCACATATCTA 81684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454958541075