Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq37 141 8e-29 seq1 100 2e-16 seq207 91.5 1e-13 >seq37 Length=429747 Score = 141 bits (156), Expect = 8e-29 Identities = 341/515 (66%), Gaps = 6/515 (1%) Strand=Plus/Minus Query 130424 ATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCTGTTTTGAGTCCAATTTTG 130483 ||||||| || ||||| | || ||||||||||| || || || || || | || Sbjct 384039 ATGGCATCAGTTGCCGGTTGCGTACGCAAATAATAAGCACCGGTCTTAAGACCCTTCTTC 383980 Query 130484 TGTCCATAATTGTGGATGCTGCACATTGTTTGGTAATTGGGTTGCGCCACGAATATGTTG 130543 ||| ||| ||| ||||| | | | | | | |||||| ||| | | ||||| Sbjct 383979 CATCCGTAAAAGTGCATGCTAGTAAGTTTACCGAACGTAGGTTGCTCCAGGTAAATGTTT 383920 Query 130544 AGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTA 130603 ||||||||||| || ||||| || | || | ||| ||||||||||||| ||||| || Sbjct 383919 AGCGATTGCGACTGGTCAATGAACACTCCTCGGTCAGCAGCCATGTCGATAATGGTCTTT 383860 Query 130604 TTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCGCAATC 130663 | ||| |||||||| | |||||||| |||||| | ||||| | || || | | |||| Sbjct 383859 TGTTTGATCTCCCATACCGTCTTGTAAAGATCCTTGATGTGCTGAGGGATACCCTCAATG 383800 Query 130664 GATTGAACGCTACCGTTGTTGGCTATAA---TTTCGTTGCGCATACTTTTATCGTACAAT 130720 | | | | || |||| || |||| |||| || ||| || | ||| | | | Sbjct 383799 TGTCGTAAGGATCCATTGTAAGCAATAAGTTTTTCCTT---CATGCTCTCATCCCAGAGT 383743 Query 130721 CCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGG 130780 || || | ||||| || | ||| ||| || | | ||| || ||| || Sbjct 383742 CCCAGGTCCACAAGGTCGCGCAGCAAGTGAGGGTTCACAACGAAAAACTCGCCACTAAGC 383683 Query 130781 ACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATT 130840 || || | | ||| || ||||||||| | ||||| || || |||||||| || | || Sbjct 383682 ACACGCCGATAGTAGATATTGCTCGTGTAAGGTTCGAAAGACTCGTTGTTTCCCAGAATC 383623 Query 130841 TGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTC 130900 |||| || | ||| |||||||| |||| ||||| || || || | ||||| | Sbjct 383622 TGTGACGTCGATGCCGTGGGCATCGGGGCCAAGAATAGTGAGTTGCGCAAGCCGTGTTTG 383563 Query 130901 GTGATTTTTCGCTTCAATTCATCCCAATCCCATAG 130935 | || ||||| | || ||||| ||||| || Sbjct 383562 GCCATGCGACGCTTGAGATCGTCCCAGTCCCACAG 383528 >seq1 Length=768689 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||| ||||| |||||||||||||| || | || | || || Sbjct 684069 ACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGACAATGTACGACCATCCTCA 684010 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || || ||| |||| | |||||| || ||||| || | |||||| || || | Sbjct 684009 AGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGG 683950 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | |||| | ||||| ||| || || || | ||| || | ||| Sbjct 683949 ATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCCACCTCCAAAGTGATGGTTTTA 683890 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAATTTATTAAA 27268 ||||| | || ||||| || || ||||||| ||| |||| ||||||| Sbjct 683889 CCCGTTAAGGTCTTCACGAAAATCTGCATAGTGCCTACAAATATATTAAA 683840 >seq207 Length=758373 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| || | |||||||| | ||| ||||| || || |||||||| Sbjct 499152 CCTCCCCTCAAACGAAGCACCAAATGAAGGGTACTTTCTTTCTGGATGTTGTAGTCAGAG 499093 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || |||||||||||||||||| |||| | ||| || ||||| || || Sbjct 499092 AGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAAATCAAACGTTGCTGATCTGGGGGA 499033 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||| || |||||| || | | |||| | |||||| ||| || || Sbjct 499032 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGCTCCACC 498973 Query 27201 TCTAGAGTTATAGATTTGCC 27220 |||| || |||| ||| || Sbjct 498972 TCTAAGGTGATAGTTTTACC 498953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933286539080