Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq37 226 4e-54 seq86 84.2 3e-11 >seq37 Length=429747 Score = 226 bits (250), Expect = 4e-54 Identities = 844/1307 (65%), Gaps = 42/1307 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||||||| ||||||| || || || |||| ||||| |||| || || | || || Sbjct 383670 TAGATATTGCTCGTGTAAGGTTCGAAAGACTCGTTGTTTCCCAGAATCTGTGACGTCGAT 383611 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| || |||| || || ||| || | || | || ||||| | Sbjct 383610 GCCGTGGGCATCGGGGCCAAGAATAGTGAGTTGCGCAAGCCGTGTTTGGCCATGCGACGC 383551 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG------CCACATATCAAAC 118355 |||||| |||||||||| | || || | ||| || ||| | |||||| Sbjct 383550 TTGAGATCGTCCCAGTCCCAC---AGTTTGTTATCCACCGTAGCACCCCAGAGGTCAAAC 383494 Query 118356 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415 || || |||| | || || ||||| || | | | ||||| || || || | ||| Sbjct 383493 TGTAGTTTACCCTTCGAAGCAGGCGAACCTTGATAAGTCTCGTAGGGTCCATGTTTCTCA 383434 Query 118416 GCCAATTCGGAGCTCGCCTCG---AGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCA 118472 |||||| ||| | | ||| || | | | || || ||||| || || ||| Sbjct 383433 GCCAAT---GAGATAGACTCATCCAGACATCCATAGTAGATGGTTTCGAAGATACGACGG 383377 Query 118473 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 118532 || | | ||||||| || || || || || | | | || || || || || Sbjct 383376 TTTAATTCCTTGGCTTCTTCCGACTCGAAAGGGTACCTCATTAACATGAAAGTGTCAGCC 383317 Query 118533 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT--AGACTTCCGAGCGGTCT 118590 |||||||| || || | |||||||| | ||| | || |||||| || || Sbjct 383316 AGACCTTGTACTCCAACACCAATTGGCCTATGGCGTTGGTTGGAGACTTT-----GGCCT 383262 Query 118591 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 | || ||||| |||||| || || | ||| |||| || |||| || || Sbjct 383261 CTGGAACCGGATAGTAATTCCGGTCAATGATCCTGTTTAAGTTGAATGTGATGACACGTG 383202 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA 118707 | |||| || || | | |||| | | || ||||| | || |||||| |||| | Sbjct 383201 CCACATCATATAGTTTCTTGAAATCGTATGTTCGTGTCTCCTTGTTCACATACATAGGCA 383142 Query 118708 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 | || || || |||| ||| || || | || || | |||||||| | ||||| Sbjct 383141 GCGCTATAGATGCCAAATTGCAGACTGCCACTTCCTCTGGAGAAGTGTACTGAACAATTT 383082 Query 118768 CCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 118827 | |||| |||||| || ||||| || | |||| ||| ||||| || | ||| | Sbjct 383081 CACAACACAGGTTTGACGATTTTATGGTTCCAAGATTCTGTTGGTTTGATTTAGCGTTGC 383022 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA--GC 118885 | ||||| ||||| |||||| |||| | || || || ||||| ||| |||| || Sbjct 383021 AGGCATCTTTGTATAGCATGAATGGGTTGCCTGTTTCGATTTGG--CTTTGTAATATGGC 382964 Query 118886 CTTCCAGACA-TCGGCAGCTGGCACAGTGG--CGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 ||| | | || | ||||| | || ||| || ||||| || | || || || Sbjct 382963 AAACCATAGAGTCTGG-GCTGGTATGGTTTTACGTC--CTAGCCCCGCTGCTTCATATTT 382907 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTG 119001 |||||| || || || || || |||||| | || | || ||| | || || ||||| Sbjct 382906 TGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCG-GCATTCATCTG 382848 Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061 |||| | || | ||| | | | ||||||| | ||||||||| || || || |||| Sbjct 382847 GGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATCAGGTATCC 382788 Query 119062 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 119121 | | || |||| | ||| | | | ||||||||| | || ||||| ||| | | Sbjct 382787 ATAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTTACGTAGGT 382728 Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 119181 |||| || ||||||||||| |||||||| ||||||| ||| | || | |||||||| | Sbjct 382727 CCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGACCCCTTGC 382668 Query 119182 G---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238 | | |||| | || | |||||| || ||||| || || || | ||| | ||| || | Sbjct 382667 GTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGCAACATAGGTA 382608 Query 119239 TGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGT 119298 ||||| | | || || ||||| || ||||| || | | || |||| | || Sbjct 382607 CAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCCTGATTTTGT 382548 Query 119299 GG-ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357 || ||| || ||| ||||| || || || || ||| ||||| | || | | Sbjct 382547 GGCATG-CCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTGTCAAGGTA 382489 Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417 | | || ||| | | |||||| | || | | | | |||||| || |||||||| Sbjct 382488 TCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTTGACATTTGT 382429 Query 119418 GGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 || || ||||| || | | |||||| ||||| ||||| || |||| Sbjct 382428 GGTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAA 382382 >seq86 Length=883075 Score = 84.2 bits (92), Expect = 3e-11 Identities = 113/155 (73%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 179965 AGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGC-AACTGCGAGGGT 180023 || || |||||||| || | || |||||||| || ||||||||||| || || ||| Sbjct 115655 AGTGGAAACACACCATAATTGTCTCGACCAACAACTGAGAGACCAGCTAAACATGA-GGT 115597 Query 180024 CTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCTGC 180083 ||| || || || ||||| |||| ||||| ||||| | | | || || ||||| Sbjct 115596 CTTGGCAGAGTCTCCCTCTGTCAATATGAGAGTACATTCACGGGCATGACGAGTACCTGC 115537 Query 180084 CTTGTTCGCGTCGTCCAACTTGGGAATACCAGTAA 180118 |||||| || || || ||||| || || ||||||| Sbjct 115536 CTTGTTAGCATCTTCTAACTTAGGGATCCCAGTAA 115502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433537955400