Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq37 111 2e-19 >seq37 Length=429747 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 55715 ATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTG 55774 || |||| || ||||||| ||||| |||||| |||||||| ||| |||| | Sbjct 383810 ATCCCTCAGCACATCAAGGATCTTTACAAGACGGTATGGGAGATCAAACAAAAGACCATT 383869 Query 55775 ATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTC 55834 || |||||| |||||| || || | || ||| |||||||| || || || ||||| | | Sbjct 383870 ATCGACATGGCTGCTGACCGAGGAGTGTTCATTGACCAGTCGCAATCGCTAAACATTTAC 383929 Query 55835 ATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGAAGGG 55893 ||||| | ||| | | | || | | || | |||||||||||||| ||||||||||| Sbjct 383930 CTGGAGCAACCTACGTTCGGTAAACTTA-CTAGCATGCACTTTTACGGATGGAAGAAGGG 383988 Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGAC 55923 || ||||| ||| || ||| |||| || Sbjct 383989 TCTTAAGACCGGTGCTTATTATTTGCGTAC 384018 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || || || |||||| | || | ||||| || || | || || | || |||||| Sbjct 382601 GGTATTGTACCTATGTTGCGTATTTTCAATGCTACTGCAAGATATGTAGATCAAGGTGGT 382660 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 ||||| |||||||||||||| ||||| ||| | || || |||||||| || || ||||| Sbjct 382661 GGGAAACGCAAGGGGTCGTTTGCCATATACTTGGAACCATGGCACGCTGATATCATGGAT 382720 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGA 53646 || | || || ||| ||||| || | ||||| Sbjct 382721 TTCTTGGACCTACGTAAAAATCACGGAGCTGAAGA 382755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214529357000