Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 152 6e-32 seq37 84.2 2e-11 >seq1 Length=768689 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || || || || || ||| | ||||| ||| | || Sbjct 683861 ATGCAGATTTTCGTGAAGACCTTAACGGGTAAAACCATCACTTTGGAGGTGGAGCCCAGT 683920 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| |||| | ||||| || || || ||||||||||| || ||||| |||||| Sbjct 683921 GACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCAG 683980 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| ||||| |||||||| ||||||| |||||| | | ||||| ||| Sbjct 683981 CAGCGTTTGATTTTCGCTGGCAAGCAACTTGAGGATGGTCGTACATTGTCTGACTACAAT 684040 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||| ||||||||| | || | ||||| | ||||| Sbjct 684041 ATTCAGAAAGAAAGTACTCTTCATTTGGTTCTTCGTCTGAGGGGTGG 684087 >seq37 Length=429747 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 80036 GCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAG 80095 |||| |||| ||| || || ||||| || ||||||||||| ||||| | |||||| Sbjct 384020 GCGTACGCAAATAATAAGCACCGGTCTTAAGACCCTTCTTCCATCCGTAAAAGTGCATGC 383961 Query 80096 AACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGA 80155 | | || || | | || || | ||||| | | ||||| || || || ||||| | Sbjct 383960 TAGTAAGTTTACCGAACGTAGGTTGCTCCAGGTAAATGTTTAGCGATTGCGACTGGTCAA 383901 Query 80156 TGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTG 80215 |||| | || || || || ||||| || ||||| | ||||||| || |||||||| | Sbjct 383900 TGAACACTCCTCGGTCAGCAGCCATGTCGATAATGGTCTTTTGTTTGATCTCCCATACCG 383841 Query 80216 T 80216 | Sbjct 383840 T 383840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308867290800