Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq207 113 1e-19 >seq207 Length=758373 Score = 113 bits (124), Expect = 1e-19 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || ||||| || || | || || | |||||| Sbjct 499665 AGTACCAAGTGAAGGGTACTTTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGGCCATCT 499606 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||||||||| ||||| || || || |||| || || |||||| Sbjct 499605 TCAAGTTGCTTCCCCGCGAAGATAAGACGTTGCTGATCTGGGGGAATACCCTCTTTGTCC 499546 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || || |||||||||||| | ||| ||||| | ||||| || Sbjct 499545 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGTTCTACCTCCAATGTGATGGTT 499486 Query 211083 TTTCC 211087 || || Sbjct 499485 TTACC 499481 Score = 111 bits (122), Expect = 4e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| ||| |||||| || ||||| || || | || || | || || || |||||| Sbjct 499392 TGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGACCGTCCTCAAGCTGC 499333 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||| || | || |||||||| || |||| || || ||||||||||||||| Sbjct 499332 TTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCTTTGTCCTGGATCTTT 499273 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 || ||||||||||| |||||| | ||| ||||| | ||||| || || || Sbjct 499272 GCCTTGACGTTTTCGATAGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTTACC 499217 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 210924 TCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAG 210983 ||||| |||||||| || || | || || | ||||| || ||||| || || ||||| Sbjct 499116 TCTTTCTGGATGTTGTAGTCAGAGAGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAA 499057 Query 210984 ATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTT 211043 || | ||||| || || || |||| || || ||||||||||||||| || |||||| Sbjct 499056 ATCAAACGTTGCTGATCTGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTT 498997 Query 211044 TCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 ||||| |||||| | || ||||| | ||||| || || || Sbjct 498996 TCGATAGTGTCACTGGGCTCCACCTCTAAGGTGATAGTTTTACC 498953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148806898475