Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 123 6e-23 seq207 113 1e-19 seq2 105 2e-17 seq141 89.7 1e-12 >seq1 Length=768689 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| |||||| || | |||||| || | ||| || | ||||| || || ||| Sbjct 684063 TGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGACAATGTACGACCATCCTCAAGTTGC 684004 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || |||||||| || | || || ||||| || || ||||| ||||||||||||||||| Sbjct 684003 TTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTG 683944 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| ||| |||||||| || ||||| || || ||||| || || ||||| Sbjct 683943 GCCTTAACATTTTCAATGGTGTCACTGGGCTCCACCTCCAAAGTGATGGTTTTACCCGTT 683884 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| | ||||| Sbjct 683883 AAGGTCTTCACGAAAATCTGCAT 683861 >seq207 Length=758373 Score = 113 bits (124), Expect = 1e-19 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 225522 TTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAA 225581 |||||| || | ||||| || | | || | |||||||| || |||||||| ||||| Sbjct 499645 TTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGGCCATCTTCAAGTTGCTTCCCCGCGAA 499586 Query 225582 GATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGC 225641 |||||| ||||| || || || |||||||| || ||||| ||||||||| ||| ||| Sbjct 499585 GATAAGACGTTGCTGATCTGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACATT 499526 Query 225642 TTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCC 225686 ||||||||||| || ||| || || || ||||| || || || Sbjct 499525 CTCGATGGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTTACC 499481 >seq2 Length=536306 Score = 105 bits (116), Expect = 2e-17 Identities = 87/106 (82%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||||||||| ||||| || || |||||||||||||| |||||||| || || ||||| || Sbjct 278235 GAATATTTGTCCATCTGTGATCGAGATAACATTTGTCGGGATATAGGCGGACACATCTCC 278294 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 ||| |||||||||| || ||||| ||||| || ||| |||||| Sbjct 278295 TGCCTGTGTTTCGATAATTGGTAATGCTGTAAGGCTTCCTCCACCA 278340 >seq141 Length=30803 Score = 89.7 bits (98), Expect = 1e-12 Identities = 107/143 (75%), Gaps = 3/143 (2%) Strand=Plus/Plus Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794 ||||||||||| |||| | | |||||||||||| |||| || | ||| || || | Sbjct 7783 TTGGTAAGATTTTTTGGGCTGCATCAAATTAAACAACATGGCTCATCACTTGTATAAGTT 7842 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-ACG 7853 ||||||||| |||||| ||| | |||||| ||| || ||||| ||||||||| ||| Sbjct 7843 CCCGTCAGTTCCTTTGAATTTAACTCTTGCGAATGTACTATTCAGGCGGAATATTTAACG 7902 Query 7854 CGTTAGCTTAATTAATATAAAAA 7876 ||| ||| | ||| |||||| Sbjct 7903 TATTAACTT--TAAATTTAAAAA 7923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192527914949210