Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq37 163 4e-35 seq207 86.0 9e-12 >seq37 Length=429747 Score = 163 bits (180), Expect = 4e-35 Identities = 473/718 (66%), Gaps = 14/718 (2%) Strand=Plus/Minus Query 77903 TTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCA 77962 |||||||| || || || || ||||| || ||||||||||||| | || |||| Sbjct 382915 TTCATATTTTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCGGCA 382856 Query 77963 TTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATC 78022 ||||| ||||||||| | || ||||||| | | | ||| ||||| ||||| || ||||| Sbjct 382855 TTCATCTGGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATC 382796 Query 78023 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTT 78082 ||||||||||| ||| || | ||||| | || ||||||| ||| ||| || Sbjct 382795 AGGTATCCATAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTT 382736 Query 78083 TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGC-CATAA 78141 || || | || ||||| ||||||| ||||||||||| | ||||| || | | Sbjct 382735 ACGTAGGTCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCAAACGA 382676 Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201 | || | ||||| ||| || ||||||| |||||| || || ||| ||| | || Sbjct 382675 CCCCTTG-CGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGCA 382617 Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261 |||| || | ||||||||| | | || ||||| || ||| ||| |||||||| | Sbjct 382616 ACATAGGTACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCC 382557 Query 78262 GAATATTACTAATGG-AT---ATCCCTATTCCTCCTGC-CATCTTAGATATTAGAGCGCA 78316 || || ||| || | ||||| ||||| || ||| || || | ||||| Sbjct 382556 TGATTTT----GTGGCATGCCAAACCTATACCTCCAGCACAT-TTGCTGATGAATGCGCA 382502 Query 78317 ACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACA 78376 || |||| ||||| | || || | | |||||| |||| | || | || || Sbjct 382501 TTGTGTCAAGGTATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCA 382442 Query 78377 GCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436 || |||||||| | || |||| || | ||| || | ||||| || || Sbjct 382441 ACTTGACATTTGTGGTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAA 382382 Query 78437 CCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAAT 78496 |||||| | | || | || || | || | | ||| ||||| | ||| || Sbjct 382381 ATATTTTTGACTCATGAGGTGATAAGTCTGTATTGTTCGTTCAATGTCACCACAATGTAT 382322 Query 78497 TCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTT 78556 ||| | | || ||||| ||||| || || ||||||||| |||| || || Sbjct 382321 CCCTGCTGACACCCGCATTAACATGTGTTGTGGTCTTTCAGAAACTTTATCGTTAATGCG 382262 Query 78557 CAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCT 78613 | | |||||| | ||||| ||||| | ||||||||| | ||| || ||| ||||| Sbjct 382261 TAGAAGGTATGACCTCTCCAATGTTTTCAGACCAAAATAATCGTACTGGAAA-TCTCT 382205 >seq207 Length=758373 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTA 48608 || || |||||||| || || |||| ||| || |||| | | ||| | ||| ||||| Sbjct 377601 CTGGCTGCAAAAAAGGCCAAGACATTTTTGATGAAATGTGTCTCGCCAGGAGTGAGTTTT 377542 Query 48609 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCT 48668 | ||| || || | ||| ||||| || | ||||||||| ||||||||||| |||| | Sbjct 377541 TCCCAATCCTTTAAGTCTGCTGATAAGTCCAATTCTTCAGCAGTCCAAAATGACGCCTGT 377482 Query 48669 GCTTTTTTATAC 48680 ||||| || ||| Sbjct 377481 GCTTTCTTGTAC 377470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694666933077600