Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq37 149 9e-31 >seq37 Length=429747 Score = 149 bits (164), Expect = 9e-31 Identities = 468/720 (65%), Gaps = 4/720 (1%) Strand=Plus/Minus Query 76498 TTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACA 76557 |||||||| ||| || | || ||||| || ||||||||||||| | ||| | || Sbjct 382915 TTCATATTTTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTCGGCA 382856 Query 76558 TTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATC 76617 ||||| || ||||| | || ||| ||| | | | ||| ||| | ||||| || ||||| Sbjct 382855 TTCATCTGGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACAGATC 382796 Query 76618 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTT 76677 ||||||||||| ||| || | ||||| | || ||||||| ||| ||| || Sbjct 382795 AGGTATCCATAATGCATAGAACAAATCTCTAGCCCTTGCTTCTTCAGCTCCGTGATTTTT 382736 Query 76678 TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAAC 76737 || || | ||| ||||| ||||||| ||||||||||| | ||||| | || | Sbjct 382735 ACGTAGGTCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATAT-GGCAAACG 382677 Query 76738 ACCCGGT-CGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCA 76796 |||| | ||||| ||| || ||||||| |||||| ||||| ||| ||| | || Sbjct 382676 ACCCCTTGCGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATACGCA 382617 Query 76797 ACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC 76856 |||| || | ||| ||||| | |||| ||||| || ||| ||| |||| ||| | Sbjct 382616 ACATAGGTACAATACCGTTGCTTTTACCGTTTGTACCGCGAATGTAAGCACCACTTGCCC 382557 Query 76857 GAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTT 76916 || || | | ||||| ||||| || ||| ||| | || || || Sbjct 382556 TGATTTTGTGGCATGCCAAACCTATACCTCCAGCACATTTGCTGATGAATGCGCATTGTG 382497 Query 76917 TCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAG 76976 |||| || ||| | || || | | ||||| |||| | || | || || || | Sbjct 382496 TCAAGGTATCAAATATTCCAGCCAGGGAGTCATCTTTCATATCCAGTAAGAAGCAACTTG 382437 Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036 ||||||| | || |||| || | ||| || | ||||||||||| ||| Sbjct 382436 ACATTTGTGGTCTTGGTGTCCCTGAGAAGAAGAGTGTTGGCGTCGCATGAGTGAAATATT 382377 Query 77037 TTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTA 77096 ||| | | || | || || | || | ||| || || | ||| || ||| Sbjct 382376 TTTGACTCATGAGGTGATAAGTCTGTATTGTTCGTTCAATGTCACCACAATGTATCCCTG 382317 Query 77097 CAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACA 77156 | | || ||||| ||||| || || |||| ||| | |||| || || | | Sbjct 382316 CTGACACCCGCATTAACATGTGTTGTGGTCTTTCAGAAACTTTATCGTTAATGCGTAGAA 382257 Query 77157 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCTTTCGTAA 77215 |||||| | ||||| ||||| | ||||||||| | ||| || ||| |||||| |||| Sbjct 382256 GGTATGACCTCTCCAATGTTTTCAGACCAAAATAATCGTACTGGAAA-TCTCTTGTGTAA 382198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932483988800