Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 seq207 89.7 4e-13 >seq1 Length=768689 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || ||||| | | |||| ||||| || || || || || || ||||| || Sbjct 684090 ATACCACCCCTCAGACGAAGAACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCA 684031 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | | | || | || || || ||||| || || || |||||||||||||| || | | Sbjct 684030 GACAATGTACGACCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGA 683971 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | ||| ||||| || ||||| ||| | || | |||||||| || ||| Sbjct 683970 GGGATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCC 683911 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || || || ||||| | |||||||||||| || ||||| Sbjct 683910 ACCTCCAAAGTGATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTGCAT 683861 >seq207 Length=758373 Score = 89.7 bits (98), Expect = 4e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| |||||||| || || |||||||| || | |||| || |||| || Sbjct 499398 ACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGACCGTCCTCA 499339 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || ||||||||||| || |||| || | ||| || || ||| Sbjct 499338 AGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCTTTGTCCTGG 499279 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | || | || ||||| || ||| ||||||| || || || || Sbjct 499278 ATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTTA 499219 Query 44309 CC 44310 || Sbjct 499218 CC 499217 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || |||| | | ||||| ||||| || || || || ||||||||||| Sbjct 499159 TTGCATACCTCCCCTCAAACGAAGCACCAAATGAAGGGTACTTTCTTTCTGGATGTTGTA 499100 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | |||| || | || || ||||| || ||||| || |||||||| |||||||| Sbjct 499099 GTCAGAGAGTGTACGGCCATCCTCGAGCTGTTTACCGGCGAAAATCAAACGTTGCTGATC 499040 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||| || || ||| ||||| ||| | || | || ||||| || Sbjct 499039 TGGGGGAATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGG 498980 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCC 44310 |||||||| | || || || || || Sbjct 498979 CTCCACCTCTAAGGTGATAGTTTTACC 498953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989456712655