Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq207 129 1e-24 seq1 98.7 2e-15 >seq207 Length=758373 Score = 129 bits (142), Expect = 1e-24 Identities = 131/169 (78%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 177946 CAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACACCATCGAGAACGTCAAACA 178003 |||| ||||| |||||| | |||||||| || ||| |||| ||||| |||||||| Sbjct 498951 CAGGTAAAACTATCACCTTAGAGGTGGA--GCCCAGTGACACTATCGAAAACGTCAAGGC 499008 Query 178004 AAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAA 178063 |||||| ||||||||||| || || || || || |||||||| | || |||||||| || Sbjct 499009 AAAGATCCAGGACAAAGAGGGTATTCCCCCAGATCAGCAACGTTTGATTTTCGCCGGTAA 499068 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112 ||||||||| ||||| | || || | || || ||| |||| |||||| Sbjct 499069 ACAGCTCGAGGATGGCCGTACACTCTCTGACTACAACATCCAGAAAGAA 499117 Score = 120 bits (132), Expect = 7e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 177947 AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAA 178006 ||| ||||| ||||| | ||||| ||| | |||||||||||||| ||||| ||| Sbjct 499480 AGGTAAAACCATCACATTGGAGGTAGAACCCAGTGACACCATCGAGAATGTCAAGGCAAA 499539 Query 178007 GATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACA 178066 ||| ||||||||||| || || || || || |||||||| ||||||||||| || || || Sbjct 499540 GATCCAGGACAAAGAGGGTATTCCCCCAGATCAGCAACGTCTTATCTTCGCGGGGAAGCA 499599 Query 178067 GCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112 || |||||||| | || || | || || ||| | || |||||| Sbjct 499600 ACTTGAAGATGGCCGTACACTCTCTGACTACAACATTCAGAAAGAA 499645 Score = 95.1 bits (104), Expect = 3e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 177947 AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAA 178006 ||| ||||| ||||| | ||||| ||| | ||||| ||||| |||||||| ||| Sbjct 499216 AGGTAAAACCATCACATTGGAGGTAGAACCCAGTGACACTATCGAAAACGTCAAGGCAAA 499275 Query 178007 GATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACA 178066 ||| ||||||||||| || || || || ||||| || || | || ||||| ||||| || Sbjct 499276 GATCCAGGACAAAGAGGGTATTCCCCCAGACCAACAGCGTTTGATTTTCGCTGGAAAGCA 499335 Query 178067 GCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||| || || || | || || | || || ||| | || ||||| Sbjct 499336 GCTTGAGGACGGTCGTACACTCTCTGACTACAACATTCAGAAAGA 499380 >seq1 Length=768689 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/157 (75%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || ||||||||||| || | || || ||||| ||||| | ||||||| ||| || | Sbjct 683864 CAGATTTTCGTGAAGACCTTAACGGGTAAAACCATCACTTTGGAGGTGG--AGCCCAGTG 683921 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| || || || || ||||| || ||||| || || |||||||||||||||| Sbjct 683922 ACACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCAGC 683981 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 | || | || ||||| || || || || || ||||| Sbjct 683982 AGCGTTTGATTTTCGCTGGCAAGCAACTTGAGGATGG 684018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727884096710