Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq207 120 3e-22 seq1 118 1e-21 >seq207 Length=758373 Score = 120 bits (132), Expect = 3e-22 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||| || |||||||| ||||||||||| ||||| ||||| || || |||| || Sbjct 499398 ACCAAATGAAGGGTGCTCTCTTTCTGAATGTTGTAGTCAGAGAGTGTACGACCGTCCTCA 499339 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| || ||||| |||| ||||||||||| | ||||| | ||| |||||| || Sbjct 499338 AGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCTTTGTCC-TG 499280 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | ||||| | ||| | | |||||| || | || ||||||| || || ||||| Sbjct 499279 GATCTTTGCCTTGACGTTTTCGATAGTGTCACTGGGTTCTACCTCCAATGTGATGGTTTT 499220 Query 41833 ACC 41835 ||| Sbjct 499219 ACC 499217 >seq1 Length=768689 Score = 118 bits (130), Expect = 1e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||| ||| || || || || |||||||| || ||||| || | || || Sbjct 684078 AGACGAAGAACCAAATGAAGAGTACTTTCTTTCTGAATATTGTAGTCAGACAATGTACGA 684019 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || || |||||||| ||||| |||| ||||| ||||||| || | | |||| Sbjct 684018 CCATCCTCAAGTTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGGATACCCTCC 683959 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGT 41823 ||||| ||| || ||| ||| || | |||| || | ||||||||||| || Sbjct 683958 TTGTCTTGGATCTTGGCCTT-AACATTTTCAATGGTGTCACTGGGCTCCACCTCCAAAGT 683900 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||||||||| | ||||| |||||||||||||| Sbjct 683899 GATGGTTTTACCCGTTAAGGTCTTCACGAAAATCTGCAT 683861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302757558000