Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq10895 210 2e-49 seq23761 89.7 5e-13 >seq10895 Length=16309 Score = 210 bits (232), Expect = 2e-49 Identities = 591/893 (66%), Gaps = 26/893 (3%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| ||| || | |||||| || || || ||||| |||| ||| || || | | Sbjct 9829 TTTGGTACTCGGAGACCCTTTTTTCAAAGAAATTGGTTTTCCCCTGTAGTGAAATCATAT 9770 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 |||| |||||||| ||||| |||| | ||| ||| | ||||| | | || Sbjct 9769 CCATAAAATCAAATGGATTGGTAGAATTATATACTTTTTCACATTGAAGTTCAACCAATA 9710 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 || |||| ||||||||| | ||||||| ||| | || |||||| || || || | Sbjct 9709 GCCTGTCCGTTACAAATTCCAAATATTGGGTCATCAGTTTTGCGTTCATCCCAATGAGGC 9650 Query 16854 GTACCGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 ||| || || | |||||| | ||| ||| | |||||| | | || | | | ||| Sbjct 9649 TTACAGGTAGGGATTCCGTAATAAACTCGC-GTTCTATATCCAAGGCATTTGTTAGAATC 9591 Query 16913 CTAGCAACTCGTTCCTCGG--ACGGTGTATGTTTAAGATGT--TTAAACATCAGACATGC 16968 | || | |||| || || ||| || ||| || || || || || Sbjct 9590 TGTGTAATCCTCTCCTTGGGCACCTTGT-TGACCAAGTGGTGGTTGTGCAAATGAACGGC 9532 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 | |||||||||| | || || || | | || | ||| || ||||| ||||||||||| Sbjct 9531 GTAATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAACCCGGG 9472 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 ||| |||| |||||| |||||||| || | || | ||| |||||||| || || Sbjct 9471 CATTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAAATCCC 9412 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 || || | ||||| ||||| ||||||||||| | | | | | |||||| Sbjct 9411 TTCCACAGCGGCAAAGGCGATCAATCGTTCGGCAAAACTTGGGGAATC------AATCCA 9358 Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTT-TCTATGGCCTTAAATA 17207 | | || |||| || || |||| ||| ||| | | ||| || || |||| ||| | Sbjct 9357 TCTAAGCGCCCAATCCGCCTTTTTCTTGATGGC-TGGAAAGTTCTCAATAGCCTGAAAAA 9299 Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 | | |||||||| | ||| ||| ||| || || || | ||| ||| |||||| Sbjct 9298 GGATGTTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAGGGAGTAGGTTTCGG 9239 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 | || ||||||||||| |||||| |||||||||||| | ||| |||| ||| | Sbjct 9238 AATGGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAATATTGGA 9179 Query 17328 CTTC---CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGA 17384 |||| ||| | ||| || || | |||||| || || || || ||| ||||| | Sbjct 9178 CTTCGTTCAC--AAAAT-TCTCGGCCAAATTTTCATTTACAATCCCATCGGATGCGGCAA 9122 Query 17385 AAAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTGTAA--GAACGCGCCAG 17440 |||| ||||| ||||| || || || || |||||| | | ||| | || |||| Sbjct 9121 AAAAGGCCAAGATATGTTTTATAAAGTAACGTTCGTCGTCACT-TAATTTATCGTTCCAG 9063 Query 17441 TCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTT 17500 || |||||| | || ||| | || |||| ||||||||||| ||| | ||| Sbjct 9062 TCAGATAAATCCTGATGTAAATCAATCTCCTCGGCGGTCCAAAAACAGGCCTCACATTTT 9003 Query 17501 TTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCTATC 17553 || ||| | ||| | ||| | | || |||||||||| ||| ||||||| Sbjct 9002 TTGTACCATTCCCACAAATCGTGATGTTCAATGGGGAATATTACAAATCTATC 8950 >seq23761 Length=1799 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 17243 TCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAA 17302 ||||| | |||||||||| ||| ||||| |||||||||||||| ||||| |||||||| Sbjct 1557 TCGATCAACAGGCTGTACACTTCAGAGTGGATGTTCTCCATGGCGATCTGGAATCCGTAG 1498 Query 17303 AAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTC 17362 ||| | ||| || | || || || ||| ||| | |||| || || || | Sbjct 1497 AAGGCCCTGGCCTCAGGCATCTGGACCTCCTGAAGGAACCTGGCCGCCAGGTTCTCCAGC 1438 Query 17363 ACGATGCCGTCGCTCGCGGCGAAAAACGCCAA 17394 |||||||||||| || ||||| || ||||| Sbjct 1437 ACGATGCCGTCGGAAGCCGCGAAGAAAGCCAA 1406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516596615449200