Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq10895 122 9e-23 >seq10895 Length=16309 Score = 122 bits (134), Expect = 9e-23 Identities = 307/462 (66%), Gaps = 20/462 (4%) Strand=Plus/Minus Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 ||| | |||||||| | ||||| || | | || | ||| ||||||||||| ||||| Sbjct 9533 GCGTAATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAACCCG 9474 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 |||||| |||| |||||| ||||| || || | | ||| | ||| |||||||| || Sbjct 9473 GGCATTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAAATC 9414 Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTA---CGTAGCATCTTTATTACGA 16381 || || |||| ||||| ||||| |||||||| || | | | ||| | Sbjct 9413 CCTTCCACAGCGGCAAAGGCGATCAATCGTTCGGCAAAACTTGGGGAATC---------A 9363 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTT-TCTATGGCCTT 16440 |||||| | | |||| || || |||| || || | | ||| || || |||| Sbjct 9362 ATCCATCTAAGCGCCCAATCCGCCTTTTTCTTGAT-GGCTGGAAAGTTCTCAATAGCCTG 9304 Query 16441 AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACAT 16500 ||| | | | |||||||| || ||| ||| || || |||| | ||| | Sbjct 9303 AAAAAGGATGTTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAGGGAGTAGGT 9244 Query 16501 TTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTAT 16560 ||| || || |||||||| || |||||| ||||| || ||| | ||||||| Sbjct 9243 TTCGGAATGGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAATA 9184 Query 16561 TTGTACTTC---CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 ||| ||||| ||| ||||| || |||| || ||||| || || || || ||| Sbjct 9183 TTGGACTTCGTTCAC--AAAAT-TCTCGGCCAAATTTTCATTTACAATCCCATCGGATGC 9127 Query 16618 AGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTC 16659 |||||||| ||||| || || || || || || |||||| Sbjct 9126 GGCAAAAAAGGCCAAGATATGTTTTATAAAGTAACGTTCGTC 9085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510476657770800