Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq7091 136 5e-27 seq15381 82.4 9e-11 >seq7091 Length=10687 Score = 136 bits (150), Expect = 5e-27 Identities = 197/276 (71%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 145669 GTCAGCTGGAGCTTCAGGG------GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCC 145722 ||| ||||||||| |||| ||| | ||||| | || | |||||| || ||| Sbjct 9380 GTCCGCTGGAGCTGCAGGTCGGCCTGCTGCTGATGGTTCACATAAAGGTGCGCATCACCC 9439 Query 145723 AGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGC 145782 || ||||| |||||||||||||||||| || | ||||| | ||| |||||| Sbjct 9440 AGCGTGTGGACGAAGTCCCCGGGCTCGAGCCCGCTTGCCTGGGCCATCATCATCGTCAGC 9499 Query 145783 AGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTAC 145842 || | ||| ||| |||||||||||||| ||||| ||||| | |||||| || Sbjct 9500 AGCGCATAGGAGGCGATGTTGAAGGGCACGCCCAGAAAGATGTCGGCGCTGCGCTGATAG 9559 Query 145843 AGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGC 145902 ||||||||||| ||| || | || |||||||||||| ||||| || || |||||| Sbjct 9560 AGCTGGCAGGAAAGCCGGCCCTCGGCGACGTAGAACTGGAACAGGCAATGACACGGCGGC 9619 Query 145903 AGGGCCATG-GCGGGCAGGTCCGCCGGGTTCCAGGC 145937 | ||||||| || | | |||||| |||||||| Sbjct 9620 AAGGCCATGCGCTCG-ATCTCCGCCACATTCCAGGC 9654 >seq15381 Length=2878 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 145836 CTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCA 145895 |||||| || ||| ||||| |||||| || | |||||||| | ||||||||||| Sbjct 1241 CTGGTAAAGGGAGCACGAGAGTTCCCCGTTGGCGGCATAGAACTGAAAGAGGAGGTGGCA 1300 Query 145896 GGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCT 145955 ||| || || ||||| ||| ||||||| |||||||| || | || || ||||| || Sbjct 1301 GGGGGGGAGTGCCATCTTGGGGAGGTCCGAGGGGTTCCATGCTGAGACGATCAGCCTTCT 1360 Query 145956 GCTCTCGGGGTTCCTCTT 145973 | | |||||| |||| Sbjct 1361 GTCGTTTGGGTTCTTCTT 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588994820427600