Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq37644 111 1e-19 seq9473 104 2e-17 seq44056 82.4 7e-11 >seq37644 Length=6317 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||| ||| || || || || | ||| ||||| ||| | ||| ||| |||||| Sbjct 4540 ACCAAGCGGAGGGTGGATTCCTTCTCAATATTGTAGTCGGAGAGAGTTCGCCCATCCTCA 4481 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| |||| || | ||||||||| || || | || || |||||| | Sbjct 4480 AGTTGCTTGCCTGCGAAGATAAGTCTCTGCTGATCAGGCGGGGTCCCTTCTTTGTCTTGA 4421 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||||| ||| ||| ||| | | ||| | || || || | || ||||| || Sbjct 4420 ATTTTTTCTTTCACCGCTTCAATTGAGTCGGAAGGTTCAACATCTAAAGTGACCGTCTTC 4361 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||||||||||| |||||||||| Sbjct 4360 CCGGTCAGAGTTTTTACGTAAATCTGCAT 4332 >seq9473 Length=1265 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| ||||| ||| |||| ||||||||||||||||| || || ||||||||| Sbjct 1252 TCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCCCCTCCTTG 1193 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || ||| || || | |||| | ||| | | ||| || |||| || | | Sbjct 1192 TCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGAGAGTGATC 1133 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| ||||| || || || |||||||| Sbjct 1132 GTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 1098 >seq44056 Length=2137 Score = 82.4 bits (90), Expect = 7e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | ||| | || | ||| | || ||| || || |||||||| || | Sbjct 454 CCTCCGCGGAGTCTGAGGACGATGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 395 Query 118572 ATAGTGC-GCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | || | || | |||| ||||||||| || || |||| || ||||||||||| ||||| Sbjct 394 AGCGTCCTGCCT-TCCTGGAGCTGTTTGCCTGCAAAGATCAGGCGCTGCTGATCAGGAGG 336 Query 118631 TATGCCCTCCTTGTCTGTAATTTT 118654 ||||||||||||||| ||| || Sbjct 335 GATGCCCTCCTTGTCTTGAATCTT 312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433054804789480